Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1541 ATGGACACTCCTTCATATTACCCTCTCTCACTCCTTCTCGTACTCCTCTCCCTTCCGCCTCTTCTCACATTCTTCCTCCTCCGCCGCCGCCACTCCTCCTCCAACCGCCACCCTCCAGGACCACCAGGATGGCCAATTTTTGGCAACTTATTCCAGCTCGGAGACATGCCACACCGCACCCTCGCCAACCTAAGCCATACCTACGGCCCCGTTGTGCGCCTCCAGCTGGGAGCCATCAACACCGTCGCCATCCTCAACGCCAAAACCGCCACTGAGTTCTTCAAGTCCCACGACCACAACTTCGCCGACAGGACAATCATTCAAACCATGCGAGTCCACAACTACGACAAGTCCTCTTTAGCCCTTGCCCCTTACGGCCCTTACTGGCGCCTCATGCGCCGCCTCGTCACGGTGGACATGCTCGTGGCGAAACGCATCAACGACACCGCTCCCGTCCGGCGCAGGTGCGTCAACGACATGGTTTCCTGGGTAGCAAAAGAAGCTAAAAAACTCAAAGCCGGCGAAGGTGTCCACGTGGCAAGATTCGTGTTCTTGATGTCGTTCAATCTGTTCGGGAACCTTATGCTTTCCCAAGACATGTTTGACCCGGAATCGGAAACAGGGTCGGATCTGTTTAAAGCAATCATGGGGCTTTTGGAGTGGACGGGGCACGCGAACGTGGCGGACGTGTTCCCGTGGCTTGTGTGGGTGGACCCGCAGGGGCTGCAGCGGAGGATGAAGAGGGACATGGGAAAGGCCATTGAGATTGCTTCCAAGTTCGTGAAGGAGCGGTTGCAGCTGCAGCATAGTGATGATATGGCTAGAAAGGATTTCTTGGATGTGCTGCTTCAATTTCAGGGCGGTGGCGGTGAGGAGGCACGGAATATCTCCGACAAGGACCTCAACGTATTCATTTTGGAAATATTCATGGCCGGATCAGAAACTACAAGCAGCACGATAGAGTGGGCACTCACAGAGCTTCTGTGCAACTGCAACTGCTTAATGACGGTAAAATCTGAGCTCAACAGAGTGGTTGGAACCGCAAGGGAACTCGAAGAGAGTGACATAGAAAATCTCCCATACCTTCAAGCTGTGGTGAAAGAAACACTTCGCTTGCATCCTCCCATTCCCTTGCTTGTTCCTCGAAGGGCTATTCAAGACACAATGTTCATAGGATACTACATACCAAAAGACACGCAGGTCTTCGTGAATGCGTGGGCCATTGGAAGGGACCCAGATGTTTGGAAAGACCCTTTGACCTTCAAGCCCGAGAGGTTTATTTTTTGTGATGCTGGGTCAAAGGTAGATTATAAAGGTCAACACTATGAGTTCATTCCATTTGGTGCTGGGAGGAGGATGTGCGCGGGGGTTCCACTGGCCCACAAGGTCCTCCATTTGGTGCTGGGGTCACTGCTACATTGCTTTGATTGGGAGCTTGATAGCCATGTCACGCCATCAACCATGGATATGAGGGATAAATTGGGAATTACAATGAGGAAGCTTGAGCCCTTGCTTGCAGTGCCGAAGCTTGTTGCTCCATCGTGA 1545 0.5262 MDTPSYYPLSLLLVLLSLPPLLTFFLLRRRHSSSNRHPPGPPGWPIFGNLFQLGDMPHRTLANLSHTYGPVVRLQLGAINTVAILNAKTATEFFKSHDHNFADRTIIQTMRVHNYDKSSLALAPYGPYWRLMRRLVTVDMLVAKRINDTAPVRRRCVNDMVSWVAKEAKKLKAGEGVHVARFVFLMSFNLFGNLMLSQDMFDPESETGSDLFKAIMGLLEWTGHANVADVFPWLVWVDPQGLQRRMKRDMGKAIEIASKFVKERLQLQHSDDMARKDFLDVLLQFQGGGGEEARNISDKDLNVFILEIFMAGSETTSSTIEWALTELLCNCNCLMTVKSELNRVVGTARELEESDIENLPYLQAVVKETLRLHPPIPLLVPRRAIQDTMFIGYYIPKDTQVFVNAWAIGRDPDVWKDPLTFKPERFIFCDAGSKVDYKGQHYEFIPFGAGRRMCAGVPLAHKVLHLVLGSLLHCFDWELDSHVTPSTMDMRDKLGITMRKLEPLLAVPKLVAPS* 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1541 514 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 10 511 - -
Ahy6g1541 514 PANTHER CYTOCHROME P450 FAMILY PROTEIN 10 511 - -
Ahy6g1541 514 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 447 456 IPR017972 GO:0005506|GO:0016705
Ahy6g1541 514 PRINTS P450 superfamily signature 445 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS P450 superfamily signature 454 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 Gene3D Cytochrome P450 24 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 SUPERFAMILY Cytochrome P450 38 507 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 Pfam Cytochrome P450 38 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS E-class P450 group I signature 444 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Ahy6g1541 514 PRINTS E-class P450 group I signature 454 477 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1541 Ahy-Chr6 55184969 55217682 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1541 35 508 Cytochrome P450 AT3G52970 44.828 4.33e-145 425
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1541 K22983 - gmx:100785241 758.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1776 16 76493094 76505927 Ahy6g1541 6 55184969 55217682 hybridization