Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1539 ATGGAAGCGAATGGAATAGGTAGTGGAATTTACACTTGCATAAACACTTCATTGCTAGGAATAGAGAATAACACATTACAGCAAAACCCACACAACAATTTGCATCATCAACCTCCTCCTCCTCAAATGGTTTATTCTACACACCATGACACTGAATCACACCCTTCACAACAGCAACAACAACAGCAACCACAGCAAGCAATGAAACATGGATACCCTTATTCTTCCAAGAAACCACAGAGCAGCACCTTCAGTGATGAAGATGAACCTGGTGGTGGTTTCGGTGCAGATGAAAGCTCTGGTGACCCGAAGAGGAAGGCCTCGCCATGGCACAGGATGAAGTGGACCGACGCCATGGTTAGGCTTTTGATAATGGCGGTTTACTACATCGGAGACGAAGCTGGTTCAGAAGGTGTAGGAGGAGGAGGAGGCGGCGGTGTTGATCCAAGTGGGAAGAAGAAGAACACCGGATTGCTTCAGAAAAAAGGGAAGTGGAAATCAGTATCGAGGGCTATGATGGAGAAAGGGTTCTACGTTTCTCCTCAGCAATGTGAAGATAAATTCAATGATTTGAACAAGAGGTACAAGAGGGTCAACGATATTCTTGGAAAAGGAACAGCTTGTAGGGTGGTTGAGAATCAGAGCTTATTGGAAACCATGGATTTGTCGCTAAAGATGAAAGAAGAGGTGAGGAAGCTTCTCAATTCTAAGCACCTTTTCTTTAGGGAAATGTGTGCTTACCATAACAGTTGCGGCCACGGCGGTGGTGCTGCTGCTGTTACTGCCGCTGGTAACGGGCAGCACTCGGCTGAGGCGGGAACAGAACAACCTTTACAGATTCAACAACCGCAACCGCCACAACATCAGCAGGGACAGCAGAGATGCTTCCATTCATCGGTGAATGGGGTTGGGATGCTGAAAGAGGACGATGATGACGAGGAGGACTATGAATCTGACGATTTCTCTGACGAGGATGAAGAGGAATCAGGAGAAGGTGGTGGATCAAGGGGTCAAGTAGAGGATGATGAGAATGATGTAGTGAGGTCAAGGAAGAGACACAGGAACAAGGGAGGGTTCTGTGTGACGTCATCATCAACATCAGCATCTCAATTGATGCAGCAGTTGAACAACGAGGTTGCTGGGGTGCTGCAAGATGGGGGAAAGAATCCATGGGAGAAGAAGCAGTGGATGAAGAAGAGGGTGCTCCAGCTGGAGGAGCAGCAGGTGAGGTACCATGTGGAGGCCTTTGAGCTTGAGAAGCAGAGGCTCAAGTGGGTTCGGTTCAGTTCCAAGAAGGAGAGGGACATGGAGAGGGACAAGCTGGAGAATGAGAGGAGGAGGCTGGAGAATGAGAGGTTGCTCTTGCTTCTTCGCCAAAAGGAGCTTGAATTCACTGCTCTTCATCACCTCAAGCACCAACAACAGCAGCAACATTCTTCTACCTAG 1446 0.482 MEANGIGSGIYTCINTSLLGIENNTLQQNPHNNLHHQPPPPQMVYSTHHDTESHPSQQQQQQQPQQAMKHGYPYSSKKPQSSTFSDEDEPGGGFGADESSGDPKRKASPWHRMKWTDAMVRLLIMAVYYIGDEAGSEGVGGGGGGGVDPSGKKKNTGLLQKKGKWKSVSRAMMEKGFYVSPQQCEDKFNDLNKRYKRVNDILGKGTACRVVENQSLLETMDLSLKMKEEVRKLLNSKHLFFREMCAYHNSCGHGGGAAAVTAAGNGQHSAEAGTEQPLQIQQPQPPQHQQGQQRCFHSSVNGVGMLKEDDDDEEDYESDDFSDEDEEESGEGGGSRGQVEDDENDVVRSRKRHRNKGGFCVTSSSTSASQLMQQLNNEVAGVLQDGGKNPWEKKQWMKKRVLQLEEQQVRYHVEAFELEKQRLKWVRFSSKKERDMERDKLENERRRLENERLLLLLRQKELEFTALHHLKHQQQQQHSST* 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1539 481 MobiDBLite consensus disorder prediction 267 299 - -
Ahy6g1539 481 MobiDBLite consensus disorder prediction 25 108 - -
Ahy6g1539 481 MobiDBLite consensus disorder prediction 44 87 - -
Ahy6g1539 481 MobiDBLite consensus disorder prediction 261 365 - -
Ahy6g1539 481 Gene3D - 115 197 - -
Ahy6g1539 481 MobiDBLite consensus disorder prediction 331 350 - -
Ahy6g1539 481 Pfam Myb/SANT-like DNA-binding domain 112 246 IPR044822 -
Ahy6g1539 481 MobiDBLite consensus disorder prediction 139 160 - -
Ahy6g1539 481 PANTHER F16F4.11 PROTEIN-RELATED 1 481 - -
Ahy6g1539 481 Coils Coil 431 458 - -
Ahy6g1539 481 MobiDBLite consensus disorder prediction 307 330 - -
Ahy6g1539 481 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 1 481 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1539 Ahy-Chr6 54157909 54160117 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Ahy6g1539 Myb_DNA-bind_4 3.30E-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1539 - - aprc:113863792 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy6g1539 6 54157909 54160117 Ahy12g2989 12 119509615 119512334 PCT
Ahy6g1539 6 54157909 54160117 Ahy2g2574 2 101911690 101914409 PCT
Ahy12g2989 12 119509615 119512334 Ahy6g1539 6 54157909 54160117 PCT
Ahy2g2574 2 101911690 101914409 Ahy6g1539 6 54157909 54160117 PCT