Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1537 ATGGTCCTCAAGACGGAACTTTGCCGCTTTAGTGGCGCCAAGATCTACCCTGGGAAGGGCATCAGATTCGTTCGTGGTGATTCTCAGGTCTTTCTGTTTTCAAACTCGAAATGCAAAAGGTATTTCCACAATCGTTTGAAGCCATCAAAGCTCACATGGACTGCCATGTATAGGAAGCAACACAAAAAGGACATTGCTCAAGAAGCTGTGAAGAAGAAGCGTCGTGCTACCAGGAAGCCATACTCTAGGTCAATTGTTGGTGCTACCTTGGAAGTTATCCAGAAGAGAAGAACCGAGAAGCCTGAAGTTAGAGATGCAGCAAGGGAAGCTGCTCTTCGTGAAATTAAAGAGAGGATCAAGAAGACAAAAGATGAGAAAAAGGCTATGAAGGCAGAGGTATCGGCTAAGCAACAAAAGGCACAGGGCAAAGGCCATGTTACAAAGGTTGCTGCACCGAAAGGTCCCAAACTTGGTGGAGGAGGTGGCAAACGCTGA 495 0.4667 MVLKTELCRFSGAKIYPGKGIRFVRGDSQVFLFSNSKCKRYFHNRLKPSKLTWTAMYRKQHKKDIAQEAVKKKRRATRKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAALREIKERIKKTKDEKKAMKAEVSAKQQKAQGKGHVTKVAAPKGPKLGGGGGKR* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1537 164 CDD Ribosomal_L24e_L24 3 56 IPR000988 -
Ahy6g1537 164 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 6 58 - -
Ahy6g1537 164 Gene3D Ribosomal protein L24e 3 64 IPR038630 -
Ahy6g1537 164 PANTHER 60S RIBOSOMAL PROTEIN L24 1 164 IPR000988 -
Ahy6g1537 164 MobiDBLite consensus disorder prediction 121 164 - -
Ahy6g1537 164 Coils Coil 112 139 - -
Ahy6g1537 164 Gene3D - 69 148 - -
Ahy6g1537 164 SMART 4TRASH 8 46 IPR011017 -
Ahy6g1537 164 Pfam Ribosomal protein L24e 4 67 IPR000988 -
Ahy6g1537 164 ProSitePatterns Ribosomal protein L24e signature. 10 27 IPR023442 -
Ahy6g1537 164 PANTHER LOW QUALITY PROTEIN: 60S RIBOSOMAL PROTEIN L24-LIKE 1 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1537 Ahy-Chr6 53887718 53889359 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1537 1 157 Cytoplasmic Ribosomal Protein Gene Family AT2G36620 82.803 2.63e-86 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1537 K02896 - gmx:100499884 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy6g1537 6 53887718 53889359 Ahy12g2992 12 119539137 119541046 PCT
Ahy6g1537 6 53887718 53889359 Ahy2g2577 2 101941212 101943121 PCT
Ahy12g2992 12 119539137 119541046 Ahy6g1537 6 53887718 53889359 PCT
Ahy2g2577 2 101941212 101943121 Ahy6g1537 6 53887718 53889359 PCT