Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1485 ATGTGTGTCTACTCAATCATAGCTAATTCTTTGAGAGAGAGAGAGAGAGAGGATCCTAGAGTTTGGAACCGAGAAGTGTATCGAAGATTGGAGAACGAGTCTTTTTCAATCTTTGTCGATAATCTTCCAGAGGACATATCGAAGAGGGAACTGTTTCAGCTGTTCAATTGGATTGGACGCATAAACGACATATACTTAGCGAGAAAACAGAAGCATAGTGGTATATACATTTTTGCGTTTATACGCTACACTACGAAAGGAGGGGCCTTGAAGGCTATAGATGAGATGAATCGTATGAGATTGAGAGGTAAAATGGTCTTCGTGGGGGAAGCTAAATACAAGAGAATGTCCGATGTAAAAGACATGAGTAAGACTCAGCCACATGGTGACGATCGAAATGCTATGCCTCGTCAAAAGCCAAAAGAAGGAGAAGAGACCAAAAAAAACCTAGCCATCTCCAATAAAGATTTGACAAAGGAGAAAATAGTTCAAGATCCACATGGGAATGGGTGGACGAAGAAGGTGGAAGTGGCTGTGGTGAAAGAAAATCTGGACTAG 558 0.414 MCVYSIIANSLREREREDPRVWNREVYRRLENESFSIFVDNLPEDISKRELFQLFNWIGRINDIYLARKQKHSGIYIFAFIRYTTKGGALKAIDEMNRMRLRGKMVFVGEAKYKRMSDVKDMSKTQPHGDDRNAMPRQKPKEGEETKKNLAISNKDLTKEKIVQDPHGNGWTKKVEVAVVKENLD* 186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1485 185 MobiDBLite consensus disorder prediction 118 167 - -
Ahy6g1485 185 CDD RRM_SF 37 108 - -
Ahy6g1485 185 Gene3D - 8 154 IPR012677 -
Ahy6g1485 185 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 35 113 IPR000504 GO:0003723
Ahy6g1485 185 SUPERFAMILY RNA-binding domain, RBD 25 115 IPR035979 GO:0003676
Ahy6g1485 185 MobiDBLite consensus disorder prediction 118 168 - -
Ahy6g1485 185 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37 104 IPR000504 GO:0003723
Ahy6g1485 185 SMART rrm1_1 36 109 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1485 Ahy-Chr6 39966716 39967273 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1485 29 97 Eukaryotic Initiation Factors Gene Family AT3G11400 31.884 5.74e-06 43.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1485 - K12891 ahf:112805528 377.096