Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1484 ATGGGAAGAGCTCCATGCTGTGACAAGGCTAATGTAAAGAGAGGGCCATGGTCTCCTGAAGAAGATGAGAAGCTGAAGAACTACATAGACAAATATGGCACTGGTGGTAATTGGATTGCTCTTCCACAAAAAGTTGGCTTGAAAAGATGTGGGAAGAGCTGTAGACTTAGATGGCTTAATTATCTGAGGCCTAACATTAAGCATGGTCAGTTCTCTGAAGCAGAAGATAGAGTAATCTGCAACCTCTTTGCTACCATTGGAAGCAGGTGGTCAATAATAGCATCTCAATTACCAGGGAGAACTGACAATGATATCAAGAATTATTGGAACACCAAGCTTAAGAAGAAAATGATGATGGCCGTCCATGATAATAGTAATAATAATAATATACTATCTTCTTCAATTCTTCAAAGGAAGCCTCCTACTCCCCCTCATCATGAACAAGTTACCCTTTTATCCATGTTGCAAAATAATCCAACATCATCATCATTCATCAGCCATCATGGTCCTGCTGATGGATCATCCTATTCTTCATACTCATCAAGCCTTCTGAGTAGTGGTGGAAATAACTCTTCTACTTCCAATTCCAATTCCAATTTTCAAGGGCAAGAAAGTAATTTGATGGGACATAGCATGTTTGTGTTTGGGGGTGAAGCTACTACTAATAGCTGCAGTTCTTCTGATGCTAGCTGCAGCAACAACAACAACAACAATCATGTGATAGAGCATGATCATCATCACCATGGAACTTTTGTTGATCTCTACAATAACAATAATAATGGTGGAATATTATGGGGAGAAAATCCATTGGTGGAGGATTATGGCATAGTAGAAGAAATCAAAGAGCTAACAGCCACTACTACTATTACTACATCTACTGCTAATTGTAATAATAACTTTTTGTTTGCTGAAAAGAAGACAGACGAAAGGGTCATGTACTACTATTGA 948 0.3861 MGRAPCCDKANVKRGPWSPEEDEKLKNYIDKYGTGGNWIALPQKVGLKRCGKSCRLRWLNYLRPNIKHGQFSEAEDRVICNLFATIGSRWSIIASQLPGRTDNDIKNYWNTKLKKKMMMAVHDNSNNNNILSSSILQRKPPTPPHHEQVTLLSMLQNNPTSSSFISHHGPADGSSYSSYSSSLLSSGGNNSSTSNSNSNFQGQESNLMGHSMFVFGGEATTNSCSSSDASCSNNNNNNHVIEHDHHHHGTFVDLYNNNNNGGILWGENPLVEDYGIVEEIKELTATTTITTSTANCNNNFLFAEKKTDERVMYYY* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1484 315 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Ahy6g1484 315 CDD SANT 71 113 IPR001005 -
Ahy6g1484 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 66 IPR017930 -
Ahy6g1484 315 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Ahy6g1484 315 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Ahy6g1484 315 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Ahy6g1484 315 CDD SANT 16 62 IPR001005 -
Ahy6g1484 315 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Ahy6g1484 315 MobiDBLite consensus disorder prediction 176 203 - -
Ahy6g1484 315 PANTHER OS09G0431300 PROTEIN 1 292 - -
Ahy6g1484 315 SMART sant 13 64 IPR001005 -
Ahy6g1484 315 SMART sant 67 115 IPR001005 -
Ahy6g1484 315 Gene3D - 7 68 - -
Ahy6g1484 315 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 117 IPR017930 -
Ahy6g1484 315 PANTHER OS09G0431300 PROTEIN 1 292 - -
Ahy6g1484 315 Gene3D - 69 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1484 Ahy-Chr6 39949286 39950823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1484 1 118 MYB Transcription Factor Family AT5G57620 87.288 1.49e-77 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy6g1484 Myb_DNA-binding 3.60E-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1484 K09422 - gmx:100301876 303.908
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy6g1484 6 39949286 39950823 Ahy12g3043 12 119929111 119932073 PCT
Ahy6g1484 6 39949286 39950823 Ahy2g2527 2 101439508 101444775 PCT
Ahy12g3043 12 119929111 119932073 Ahy6g1484 6 39949286 39950823 PCT
Ahy2g2527 2 101439508 101444775 Ahy6g1484 6 39949286 39950823 PCT