Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1444 ATGGATTCAGCTATTTCCCAAGTAGTAGTAGTTGATAGTGATGACCAATTTTCAAGGTCTTTTCAAAGTGTAGAGGAAACACATTTGGTTCATAAAAAGTCTGCATGGTACAAATTTCTTGTTTCTATTGGTGCCCATGAAATTTTTTCAATAGAGACATGGAAAACAGCATTGACTGAGTTAGTTGCAACTGCTTCTCTAATGTTCACACTGACAACCTCAATCATAGCATGTTTGGACTCGCACGAAGTTGCTGCAAAGCTTCTAGTCCCTCTTGCAGTGTTCATCATAGCCTTCTTGTTCCTAATAGTCACAATTCCACTCTCTGGAGGTCACATGAGTCCTGTTTTCACATTCATAGCAGCATTAAAGGGTGTTGTTACTCTAGTACGTGCACTAATTTATGTCATAGCACAATGCATTGGTTCAATTATTGGTTTCATTATGCTAAAATGTGTCATGGATCCAAAATTGGAACACAAATATTCATTAGGAGGATGTACAATTAGTAATGATAGTGATAAAGGACTAGGATCAAAGCCACAAGTTGCATTGTTAGTAGAATTTTCATGCACATTTTTGGTGCTATTTATTGGTATTACTTTGGGATTTGATAAGAAAAGGTCAAAGGAATTAGGATTACCTATGGTGTGTGTTGTGATTGCTGGGGCAATGGCATTGGCAGTGTTTGTGTCTATAACTGTTACTGGGCAATTGGGCTACGCAGGTGTTGGACTTAACCCAGCAAGATGTTTGGGTCCAGCTTTGTTAAAAGGTGGATTATTGTGGAATGGACATTGGGTTTTTTGGGTGGGGCCTTTCCTGGCCTGTATAACGTATTATGGGGTATCTATTAATCTGCCAAAGGAGAGTATGACTTTGGAAAATGGAGAATATGATGTGTCGAATTTGGCTTTGGGCCATAGTAAGAGTGTTTCTAGGAGTGCTGTCTCAAATGATCTTCAAGTTTGA 972 0.3879 MDSAISQVVVVDSDDQFSRSFQSVEETHLVHKKSAWYKFLVSIGAHEIFSIETWKTALTELVATASLMFTLTTSIIACLDSHEVAAKLLVPLAVFIIAFLFLIVTIPLSGGHMSPVFTFIAALKGVVTLVRALIYVIAQCIGSIIGFIMLKCVMDPKLEHKYSLGGCTISNDSDKGLGSKPQVALLVEFSCTFLVLFIGITLGFDKKRSKELGLPMVCVVIAGAMALAVFVSITVTGQLGYAGVGLNPARCLGPALLKGGLLWNGHWVFWVGPFLACITYYGVSINLPKESMTLENGEYDVSNLALGHSKSVSRSAVSNDLQV* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1444 323 SUPERFAMILY Aquaporin-like 51 279 IPR023271 -
Ahy6g1444 323 PANTHER AQUAPORIN-LIKE 24 315 - -
Ahy6g1444 323 PRINTS Major intrinsic protein family signature 228 250 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy6g1444 323 PRINTS Major intrinsic protein family signature 131 150 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy6g1444 323 PRINTS Major intrinsic protein family signature 267 287 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy6g1444 323 PRINTS Major intrinsic protein family signature 55 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy6g1444 323 PRINTS Major intrinsic protein family signature 187 205 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy6g1444 323 PRINTS Major intrinsic protein family signature 94 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Ahy6g1444 323 PANTHER MAJOR INTRINSIC PROTEIN (MIP) FAMILY TRANSPORTER 24 315 - -
Ahy6g1444 323 Gene3D Glycerol uptake facilitator protein. 40 291 IPR023271 -
Ahy6g1444 323 Pfam Major intrinsic protein 49 276 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1444 Ahy-Chr6 30168789 30170415 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1444 47 277 Major Intrinsic Protein MIP AT3G61430 27.966 4.15e-22 92.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1444 K09866 - gmx:100804160 438.728