Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1380 ATGGTTAGATCGTGTTGGAAACCAAGTGGAGATGGTGGTGATGACGATGTGAGAGGAAAAGTTGAAGGGTTGCTATGGTACAAGGATTTGGGGCACCATCTTTACGGGGAATTCTCAATGGCTGTGATCCAAGCCAATAGTTCAATAGAGGATCGAAGCCAACTTGAATCTGGACCTTTAAGTTCTGATTATATGGGTCCTCAAGGAACCTTTGTTGGTATATATGATGGTCATGGTGGTGCTGAGGCTTCACAATTTGTCAGTGACAATCTTTTCAGCAATCTCAAAAGATTTGCAGCAGAACATCAAGGAATTTCAGAAAACATTATCAAAAGGGCTTTTACTGAAACTGATGAGAGTTTTCTGTCTGTTGTGAAGAAACAGTGGCTAAGCAAGCCACAAATTGCTTCCGCGGGTTCATGTTGTTTGACAGGGATCATCTGCAACGGTATGATGTATATTGCGAACGCCGGAGACTCGAGGGCGGTGTTAGGAAGATTAGAGAGGGCAACAAGGGAGACATATGCTGTTCAAGTATCTGCAGAACACAACGTTAACATAGAGACAGAGAGAGATGAAGTTAGGTCAAGGCATCCTTATGATTCACAAATTGTGGTCATGAAACACAATGTTTGGCGTGTGAAAGGCCTAATACAGGTTTCAAGGTCTTTAGGTGATGCATATCTCAAGAAAGCAGAATTCAACAGGGAGCCTCTACCACAGAAGTTTAGGTTGCCTGAACCTTTCTTCAAGCCCATTCTTAGTTGCGAGCCATCGATATCAACACATAAACTCCATCATGATGATCAGTTTCTGATCGTTGCTTCTGATGGTCTATGGGAGCAGCTTAGCAACCAAGAAGCCGTCAACATTGTCAGCAGCAACCCACGTAACGGGATTGCTAGGAAGCTTGTAAAGGCTGCATTGCGCGAAGCAGCTAAGAAGAGAGAGATGAGATTCTCAGACCTACAAAAGATTGAAAAGGGGGTGAGGAGACACTTCCATGATGACATATCAGTGATTGTTGTGTTCCTTAACCCAAAACTCATTGATAATACCTCTCTCTGGGGTTCTCCTCTTTCAATCAAAGGCGGCGGGCCTGCCATTTCTTAG 1113 0.4385 MVRSCWKPSGDGGDDDVRGKVEGLLWYKDLGHHLYGEFSMAVIQANSSIEDRSQLESGPLSSDYMGPQGTFVGIYDGHGGAEASQFVSDNLFSNLKRFAAEHQGISENIIKRAFTETDESFLSVVKKQWLSKPQIASAGSCCLTGIICNGMMYIANAGDSRAVLGRLERATRETYAVQVSAEHNVNIETERDEVRSRHPYDSQIVVMKHNVWRVKGLIQVSRSLGDAYLKKAEFNREPLPQKFRLPEPFFKPILSCEPSISTHKLHHDDQFLIVASDGLWEQLSNQEAVNIVSSNPRNGIARKLVKAALREAAKKREMRFSDLQKIEKGVRRHFHDDISVIVVFLNPKLIDNTSLWGSPLSIKGGGPAIS* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1380 370 Gene3D - 28 354 IPR036457 -
Ahy6g1380 370 ProSiteProfiles PPM-type phosphatase domain profile. 34 345 IPR001932 -
Ahy6g1380 370 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Ahy6g1380 370 SMART PP2C_4 29 343 IPR001932 -
Ahy6g1380 370 PANTHER SERINE/THREONINE PHOSPHATASE FAMILY, 2C DOMAIN PROTEIN 3 368 - -
Ahy6g1380 370 Pfam Protein phosphatase 2C 69 314 IPR001932 -
Ahy6g1380 370 PANTHER ALPHABET, ISOFORM E-RELATED 3 368 - -
Ahy6g1380 370 CDD PP2Cc 35 345 IPR001932 -
Ahy6g1380 370 SUPERFAMILY PP2C-like 46 346 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1380 Ahy-Chr6 22742733 22745482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1380 1 366 PP2C-type Phosphatase Gene Family AT3G12620 65.041 0.0 507
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1380 K01102 - gmx:100819870 586.645
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g1529 16 34899015 34901728 Ahy6g1380 6 22742733 22745482 hybridization