Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1351 ATGAGTCAGATGAAGAGAGAAATAGATCAAATAGACTTGGCGAATTGCCTTATGCTTCTCTCTAATAATCCAATAATTAGAAAGAAAAGAAGCCTCAATAACAATGGTGAAGTGGAATTCGAGTGCAAGACATGTAACCGCAAGTTCCCATCGTTTCAAGCACTTGGAGGCCACAGAACAAGCCACAACAAGAAGCCAAAGCTGGAATCAGAACCCAACAACAACAACAACGTTGATACTAAGCCGAAGATGCACGAGTGCTCCATTTGTGGCCAAGAATTCTCTCTTGGTCAGGCACTCGGAGGCCACATGAGAAGGCACAGATCACCAAATGATCAACATCAACAACTTGTGTCTTCTATCAATGAGATTCAACATGTTGTTGCTAAAGTTCCGGTTTTCAAGAGATCTAATAGTCTAAGGGTTAGGTGCTTGGACTTGAACCTAACACCATTGGAGAATGATTTGAAGCTGCTCTTTGGAAGTATTACTCCTAATAATAAGCTTCATGCCTTAGTTTGA 522 0.4119 MSQMKREIDQIDLANCLMLLSNNPIIRKKRSLNNNGEVEFECKTCNRKFPSFQALGGHRTSHNKKPKLESEPNNNNNVDTKPKMHECSICGQEFSLGQALGGHMRRHRSPNDQHQQLVSSINEIQHVVAKVPVFKRSNSLRVRCLDLNLTPLENDLKLLFGSITPNNKLHALV* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1351 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 40 67 IPR013087 -
Ahy6g1351 173 SUPERFAMILY beta-beta-alpha zinc fingers 40 107 IPR036236 -
Ahy6g1351 173 MobiDBLite consensus disorder prediction 53 78 - -
Ahy6g1351 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 85 112 IPR013087 -
Ahy6g1351 173 Gene3D Classic Zinc Finger 37 107 - -
Ahy6g1351 173 PANTHER ZINC FINGER PROTEIN ZAT5 10 166 - -
Ahy6g1351 173 Pfam C2H2-type zinc finger 40 64 - -
Ahy6g1351 173 Pfam C2H2-type zinc finger 85 110 - -
Ahy6g1351 173 SMART c2h2final6 40 62 IPR013087 -
Ahy6g1351 173 SMART c2h2final6 85 107 IPR013087 -
Ahy6g1351 173 PANTHER AND C2HC ZINC FINGERS SUPERFAMILY PROTEIN, PUTATIVE-RELATED 10 166 - -
Ahy6g1351 173 ProSitePatterns Zinc finger C2H2 type domain signature. 87 107 IPR013087 -
Ahy6g1351 173 ProSitePatterns Zinc finger C2H2 type domain signature. 42 62 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1351 Ahy-Chr6 21041551 21042261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1351 2 161 C2H2 Transcription Factor Family AT2G37430 47.024 5.47e-43 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Ahy6g1351 zf-C2H2_6 4.60E-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1351 - - gmx:100527151 178.333