Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1333 ATGAGCTGCTTCTCTTGCCTTGTTGATGATGATCACCACGGGAAGCATGGGCCCGGGGAGATGAACAGAATGGAATTATTAATTGAGAACTACTTTAAGAAGAATAATACAGGGAGAGGGCGGAAGAAGAAGAAGCAGGATCGGGGTGAAAGCAAGACAGACGCTGCCATCAGCTTTGGTTTTCGGGAGCTTGAATGGGCAACCGACACTTTCAAGGAAGCCAACTTGATTGGGGAAGGCGGTTTTGGAAGGGTTTACAAGGGTCGTCTCTTGACAGGCCAGGTGGTTGCTGTAAAACAATTAAATCATGACGGGCATCAAGGTTTTCAAGAATTTGTGACAGAGGTGCTTATGCTTAGCCTCCTCCACCATTCTAATCTCGTTAACTTGATTGGCTATTGCACCGATGGTGAGCAGAGGCTGTTGGTGTATGAATATATGCCCATGGGTAGCCTTGAAGATCATCTTTTTGATCCTACATTGAATAATAATAAGGAAGGAGGGCTAAGTTGGATAACTCGAATGAAAATCGCGGCCGGGGCTGCTCGTGGGCTGGAGTATCTCCATTGCAAAGCAAATCCACCTGTTATCTATCGCGACTTGAAATCGGCGAATATCTTATTAGACAATGATTTCAACCCAAAACTCTCAGATTTTGGGCTCGCCAAGCTAGGGCCTGTTGGAGACAACACCCATGTTTCCACCAGAGTCATGGGAACGTACGGCTACTGCGCCCCCGAATATGCCATGAGTGGAAAATTAACTCTTAAATCCGATATTTACAGCTTTGGTGTTGTCTTGCTCGAGTTGATCACTGGTCGTAAGGCCATGGATTTCACTAGAAAACAAGGCAGCCAAAACTTAGTTTCATGGGCTCGTGCTTTCTTAAGTGACAGGAAAAAGTTTAGGCAAATGGTTGACCCTCGATTGCGGGGAAGCTATCCTGTGCGTTGCATGCATCATGCGATTTGTATAACCGCAATGTGTCTGCAGGACCAACCAATTTTTCGTCCACATGTTCGTGATATTGTTGCTGCACTAGATTACATAGTTTCTCAGAGTATTCTTGAACTCGATAAGCATGGAAGACTAGCTTCTCCCTCTGTCTCCGCCATCGTTGATGTCGTTGCTGCACCTTCTGTCGCCGGAGCTGTGTCTCTTTCCCCTTCTCCAATCTTCAAGGAACAAATCGGAGTTATCGCTCCCGACTTGGACCTTTCACCCCTCTATCTTGACAAGGTGGTCGTTGATGGGGCAATTGTCTCTCCTCCTCGTCCTAAAACTGATTCCGAGCTGAAGACTCGTGGGCAACGAATTGTTGAGTCTCCTCCTCGTGAGGTGGATCAACAGGAAGGATTTCTGCCGAGTTCTTCTGAGTCTCTGACTTTTGCCACCGAAGAAATCGCTCCGACCCCTCCGACTCCTGCAGCAGACCCGAGTTCCATTCCTCTTGATGACTCCACTCTTCCTTCCCAGTAA 1479 0.4733 MSCFSCLVDDDHHGKHGPGEMNRMELLIENYFKKNNTGRGRKKKKQDRGESKTDAAISFGFRELEWATDTFKEANLIGEGGFGRVYKGRLLTGQVVAVKQLNHDGHQGFQEFVTEVLMLSLLHHSNLVNLIGYCTDGEQRLLVYEYMPMGSLEDHLFDPTLNNNKEGGLSWITRMKIAAGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVLLELITGRKAMDFTRKQGSQNLVSWARAFLSDRKKFRQMVDPRLRGSYPVRCMHHAICITAMCLQDQPIFRPHVRDIVAALDYIVSQSILELDKHGRLASPSVSAIVDVVAAPSVAGAVSLSPSPIFKEQIGVIAPDLDLSPLYLDKVVVDGAIVSPPRPKTDSELKTRGQRIVESPPREVDQQEGFLPSSSESLTFATEEIAPTPPTPAADPSSIPLDDSTLPSQ* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1333 492 Pfam Protein kinase domain 72 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1333 492 MobiDBLite consensus disorder prediction 422 492 - -
Ahy6g1333 492 ProSiteProfiles Protein kinase domain profile. 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1333 492 CDD STKc_IRAK 77 348 - -
Ahy6g1333 492 ProSitePatterns Protein kinases ATP-binding region signature. 77 99 IPR017441 GO:0005524
Ahy6g1333 492 PANTHER OS07G0668900 PROTEIN 40 355 - -
Ahy6g1333 492 SUPERFAMILY Protein kinase-like (PK-like) 57 345 IPR011009 -
Ahy6g1333 492 SMART serkin_6 71 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1333 492 Gene3D Phosphorylase Kinase; domain 1 41 146 - -
Ahy6g1333 492 MobiDBLite consensus disorder prediction 428 445 - -
Ahy6g1333 492 PANTHER OS07G0668900 PROTEIN 40 355 - -
Ahy6g1333 492 Gene3D Transferase(Phosphotransferase) domain 1 147 363 - -
Ahy6g1333 492 MobiDBLite consensus disorder prediction 451 467 - -
Ahy6g1333 492 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1333 Ahy-Chr6 20168856 20179796 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1333 1 350 Glycoside Hydrolase AT3G07070 54.891 4.78e-136 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Ahy6g1333 Pkinase 1.00E-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1333 - - ahf:112805431 944.11