Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1328 ATGGCAAGTCAGGGCTCTAATGAAGGCTCTAGTTCCGGCATTACATCGGCTGAGTGTTCGGATTCAACTGTTCAACTCAACATCAAGACTCTAGATTCACGTGTCTATAATTTTCAACTGGACAAAAATATGCCTGTTTCGTTGTTAAAGGAGAAAATTGCTAATGAAATTGGTCTTCCAGTTGGTCAGCAACGGCTGATTTTTAGAGGAAAAGTCTTAAAGGACGAGCATGTGCTATCTGAGTATCATATCGAGAATGGGCATACCTTGCATCTAGTTGAAAGGCAACCAAATCAGTCACAGGCTTCTGGTAATAGTACTGCTGAGCCAGCTGGTGCTAATGCCTCCGTGCCTCCTCGTAACCGTGTTGGACAAATTTCACACAGTGTTGTTCTTGGAACTTTTAATGTGGGGGACCAAGGAGAAGGCATTGTTCCTGACCTTACACGGGTTATTGGGGCAGTTTTGAATTCTATTGGAATTGGTGGTCAGAACACAAGTAGTCCTCCCAATGCTACCCAACCTGCTACAGCTCCGCCAGGGAATGAAGCTGCGGGCGTGAATTCTGGGAATCAAAATGCATCTGGAAATCAAGCACAGTCTGGCCAGACATTTCCTGGTCAGGCATTCCAATCTCTGCCTCATGTTGTTCAAATTCCTGTGGCTTCTGGGGCCATACCAATCCCTTCTCTCAATGCTCCAATTCCTGATTCATTGAACACACTCTCTGAATTTATAAATCACATGGAACAGACACTATTGCTAAATGTTTATCAGTCAAATTTATCTTCAACTAATGCTGGAGATCAACGGGTTGAATTGCCTACCAATGCACAAGGGTTGCCGACAGTTGAAGCATTAAGCACCATCTTGCATCGTACAGAACAGTTGCTTAGTCATCAAGCTGTTGCTGCAATATCTCATATTGCTGGACGGTTGGAGCGAGAGGGAACTTCATCTGATTTAAGTATAAGGGATCAAATACAGTCAGAGGCAGCACACTTAGGACTTGCTATGCAGCATTTGGGCACACTTTTACTTGAGCTTGGCCGAACGATTTTAACCCTGCGTATGGGACAGTCTCCTGCAGAATCTGCTGTAAATGCTGGACCTGCAGTTTATATTTCTCCATCAGGGCCAAATCCTGTAATGGTTCAGCCCTTTCCTCTTCAGACAAACTCACTATTTGGTGGTCCTATTCCTTCTTCAACTCCTCCAGCATTTGGTGCCATTGGTATTGGAAGTGCTCCGCGGAATGTGAACATTCATATACATGCTGGTACTGCTCTTGCTCCCATTGTTTCAGCAATTAGTTCTAGGACAAATAATGGAGAAGGGACAAGAAATGAAAACCGTAATGAGCCTGGCCCTGGGGATTCAGGTTCTGCACGTGCGTTGCCCGTTAGAAATTTCATGTCGGCAGCCTTCCCATCTCACCCTCCTGGTGTTGGAGTTGCCAGTGGCACACAGACTGGGTCAGGTGTTTCTACTTCACAGCCACCACCTAATTCAACTCCATGGTCATCTGCTGCAAATGAATCGAATTTCTTTAGGAACTTGGTTCGTAATATACAAGGAGATAACACAGCTCCATCAGGTCAGATGGCATCAACTGGCCGAGACTTGTCTTCTGGTTCTGAATCAAGGTCTTCCCAGAGAGATGAGCAGGCAGATACCACCGGGATGAATGGCTTCAGAACTGCAACTGCATCCTCAGTTGGCTGTGGCTCTCTCCAAACTGAGGTAGTGCAAACCTGTGATAATGATGAGAGAGGTGTTTCAGTTGACAATTACCCTTCAAGTTCTTCCGGTCAAGGTTTACAAAGCTCTTCTGGTGGAGAAACAACAGTGAAATCAGAACAAGTAAAGGATGCTCCATCTGCAAGTGCGAAACAGGGTGTAGCTGAACCTGCCAGAGCTGCTCCTCTTGGATTGGGCATGGGTGGCTTAGAGCGTAAGAGGCGGACAGGACTTCAACCTCCTGTAAGTAAAGGCGCTGACATATCATCCGGTTCTTCTGTCAACCAAAGTCAGCAAACTGGAACAGAGGGTCAACACACATTACAAGCACTTCCAAGTCATGGCTCTTCTGTGAATGCAAGAAATCCTAATAGACCATCCCAGCAGCCGCTGCCCTCTAGTAATAGGCAGATTGATATGGCTGGTTTGATGTCTCAGGTTTTGCATAGCCCTGCTTTGAATGGTTTGCTTGAAGGGGTTTCACAGCAAACTGGGGTTGACTCACCTAATGGCTTGAGGAATATGTTGCAGCAGTTCACGCAGAGCCCACAGATGATGAACACAGTCAATCAAATTGTCCAACAGGTTGGCAGTCAGGATATGGGAAATATGTTTGCCGGGATGGAAAGGGGGCAAGGGGGTGGCATTGATTTTTCGACGATTCTTCAACAGATGATGCCTATTGGATCCCGAGCGGCTGGTGGGGATACTCCTCCTCCACTATTCTCTGCTGCAGAACCTGAGACCTTGGCACCTTGCAGAGATGAAAACTCCAATAATACAACTTTACAGCTCAACCTTCAAGAAGTGGTGGATAGGATTGATCACTTGAGCCCACCAACAGATGTTTTTCGTGCTGTGGCTGAAAATGCCGTCCTGGTATCTGGGGGTGTAAATGTTACCGATGATATTCTGGATGAGTTATGCAGTAATGAGAGTCTTGCCAGCGAATATTTGGAGACGTTGCGATATGATGTGAGACAGCGGCTAGATGGACATTCTGAGCAGGACAAGTCGTAA 2760 0.4623 MASQGSNEGSSSGITSAECSDSTVQLNIKTLDSRVYNFQLDKNMPVSLLKEKIANEIGLPVGQQRLIFRGKVLKDEHVLSEYHIENGHTLHLVERQPNQSQASGNSTAEPAGANASVPPRNRVGQISHSVVLGTFNVGDQGEGIVPDLTRVIGAVLNSIGIGGQNTSSPPNATQPATAPPGNEAAGVNSGNQNASGNQAQSGQTFPGQAFQSLPHVVQIPVASGAIPIPSLNAPIPDSLNTLSEFINHMEQTLLLNVYQSNLSSTNAGDQRVELPTNAQGLPTVEALSTILHRTEQLLSHQAVAAISHIAGRLEREGTSSDLSIRDQIQSEAAHLGLAMQHLGTLLLELGRTILTLRMGQSPAESAVNAGPAVYISPSGPNPVMVQPFPLQTNSLFGGPIPSSTPPAFGAIGIGSAPRNVNIHIHAGTALAPIVSAISSRTNNGEGTRNENRNEPGPGDSGSARALPVRNFMSAAFPSHPPGVGVASGTQTGSGVSTSQPPPNSTPWSSAANESNFFRNLVRNIQGDNTAPSGQMASTGRDLSSGSESRSSQRDEQADTTGMNGFRTATASSVGCGSLQTEVVQTCDNDERGVSVDNYPSSSSGQGLQSSSGGETTVKSEQVKDAPSASAKQGVAEPARAAPLGLGMGGLERKRRTGLQPPVSKGADISSGSSVNQSQQTGTEGQHTLQALPSHGSSVNARNPNRPSQQPLPSSNRQIDMAGLMSQVLHSPALNGLLEGVSQQTGVDSPNGLRNMLQQFTQSPQMMNTVNQIVQQVGSQDMGNMFAGMERGQGGGIDFSTILQQMMPIGSRAAGGDTPPPLFSAAEPETLAPCRDENSNNTTLQLNLQEVVDRIDHLSPPTDVFRAVAENAVLVSGGVNVTDDILDELCSNESLASEYLETLRYDVRQRLDGHSEQDKS* 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1328 919 MobiDBLite consensus disorder prediction 162 206 - -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 484 511 - -
Ahy6g1328 919 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Ahy6g1328 919 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 6 917 - -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 525 565 - -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 96 112 - -
Ahy6g1328 919 CDD Ubl_ubiquitin_like 26 93 - -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 663 715 - -
Ahy6g1328 919 SUPERFAMILY Ubiquitin-like 13 98 IPR029071 -
Ahy6g1328 919 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Ahy6g1328 919 MobiDBLite consensus disorder prediction 184 206 - -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 525 546 - -
Ahy6g1328 919 PANTHER OS07G0498800 PROTEIN 6 917 - -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 440 456 - -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 590 715 - -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 590 626 - -
Ahy6g1328 919 PRINTS Ubiquitin signature 76 97 IPR019956 -
Ahy6g1328 919 PRINTS Ubiquitin signature 55 75 IPR019956 -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 96 121 - -
Ahy6g1328 919 MobiDBLite consensus disorder prediction 440 511 - -
Ahy6g1328 919 Gene3D - 14 108 - -
Ahy6g1328 919 SMART ubq_7 24 95 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1328 Ahy-Chr6 20066686 20073825 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1328 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 38.889 1.68e-10 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1328 - - gmx:100783611 1236.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0018 16 189148 196270 Ahy6g1328 6 20066686 20073825 hybridization