Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1325 ATGGGCTTATTAAACACTGGACATGATCAGACCAATCAACAAAAGGATATCGGTACTGCTTTGAAGAATGGAAAGGAAATACTCTTTCAGGGATTCAACTGGGAGTCGCACAAGTACAATTGGTGGGAGAATCTAGAGAGCAAAGTTGGAGAGATAGCCAAAGCTGGATTCACTTCCGTTTGGTTGCCACCACCAACTCATTCCTTCTCACCTCAAGGCTACACTCCACAGAACCTTTACTCACTCAACACTAATTATGGCTCCGAGCATCACTTGAAAGCTCTGCTTGCTAAGATGAAGCAACACAAACTCAGATCCATGGCTGATATTGTCATCAATCATCGTGTTGGCACCACCCAGGGACGTGGAGGAATCTACAACCGTTTTGATGGAATCCCACTCTCTTGGGATGAACATGCTGTCACTTCGGATACTGGTGGACTTGGTAACAGAAAGACCGGCGCCATATTCCAGGGGTTCCCCAATATTGACCACACCCAAGACTTTGTGAGAAAGGATATCATAGGTTGGCTAAGATGGCTGCGCCATAACGTAGGCTTTGAGGATTTTCGTTTTGATTTTGCAAAAGGGTTTTCAGCAAAATATGTGAAAGAATATATAGAAGCAGCAAAGCCATTGTTCTGTGTAGGGGAGTACTGGGATTCTTGCAACTACAGAGGTTCTTCTTTGGACTATAACCAGGACAGCCATAGGCAGCGAATAATCAATTGGATTGATGGCACTGGACAGCTTTCAGCTGCATTTGACTTCACAACAAAAGGAATTCTCCAGGAAGCTGTGAAGGGAGAATTTTGGCGTCTGCGTGATGGTCAAGGGAAGCCGCCCGGTGTGATGGGATGGTGGCCTTCAAGATCAGTCACGTTTGTGGACAATCATGATACTGGCTCCACTCAGGCTCATTGGCCGTTCCCCTCTGATCATATTATGGAGGGATATGCATACATATTGACTCATCCTGGGATACCAACAGTTTTCTATGACCACTTGTTTGAGTGGGGCAACTCCATTCGTAACCAGATAGCGAAGCTGATTGATGTACGGAAGCGGGAAGGTATTGAGAGTAGATCATCGGTGAGGATATTGGAAGCGAAACAAAACCTATATTCAGCGATAATCGGAGACAAGGTGTGCATGAAGATTGGAAGTGCCTCATGGTGTCCATCTGCATCTCACACCCAGTGGGAACTAGCAACCTCTGGCCACAATTATGCTGTATGGCGCAAGCAGTAG 1251 0.4596 MGLLNTGHDQTNQQKDIGTALKNGKEILFQGFNWESHKYNWWENLESKVGEIAKAGFTSVWLPPPTHSFSPQGYTPQNLYSLNTNYGSEHHLKALLAKMKQHKLRSMADIVINHRVGTTQGRGGIYNRFDGIPLSWDEHAVTSDTGGLGNRKTGAIFQGFPNIDHTQDFVRKDIIGWLRWLRHNVGFEDFRFDFAKGFSAKYVKEYIEAAKPLFCVGEYWDSCNYRGSSLDYNQDSHRQRIINWIDGTGQLSAAFDFTTKGILQEAVKGEFWRLRDGQGKPPGVMGWWPSRSVTFVDNHDTGSTQAHWPFPSDHIMEGYAYILTHPGIPTVFYDHLFEWGNSIRNQIAKLIDVRKREGIESRSSVRILEAKQNLYSAIIGDKVCMKIGSASWCPSASHTQWELATSGHNYAVWRKQ* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1325 416 CDD AmyAc_arch_bac_plant_AmyA 27 365 - -
Ahy6g1325 416 PANTHER ALPHA-AMYLASE 22 415 - -
Ahy6g1325 416 SMART aamy 26 366 IPR006047 GO:0005975
Ahy6g1325 416 Gene3D Glycosidases 26 358 - -
Ahy6g1325 416 Gene3D - 359 415 IPR013780 -
Ahy6g1325 416 PRINTS Alpha-amylase signature 290 302 IPR006046 GO:0004556|GO:0005975|GO:0043169
Ahy6g1325 416 PRINTS Alpha-amylase signature 41 58 IPR006046 GO:0004556|GO:0005975|GO:0043169
Ahy6g1325 416 PRINTS Alpha-amylase signature 187 198 IPR006046 GO:0004556|GO:0005975|GO:0043169
Ahy6g1325 416 PRINTS Alpha-amylase signature 103 114 IPR006046 GO:0004556|GO:0005975|GO:0043169
Ahy6g1325 416 PANTHER ALPHA-AMYLASE 2-RELATED 22 415 - -
Ahy6g1325 416 SUPERFAMILY Glycosyl hydrolase domain 361 415 - -
Ahy6g1325 416 SMART alpha-amyl_c2 355 415 IPR012850 GO:0004556|GO:0005509|GO:0005975
Ahy6g1325 416 Pfam Alpha amylase, catalytic domain 51 115 IPR006047 GO:0005975
Ahy6g1325 416 Pfam Alpha-amylase C-terminal beta-sheet domain 356 414 IPR012850 GO:0004556|GO:0005509|GO:0005975
Ahy6g1325 416 PIRSF Alpha-amylase_plant 6 416 IPR013775 GO:0004556|GO:0005509|GO:0005975
Ahy6g1325 416 SUPERFAMILY (Trans)glycosidases 32 346 IPR017853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1325 Ahy-Chr6 19957858 19961195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1325 1 415 Glycoside Hydrolase AT1G76130 72.771 0.0 661
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1325 K01176 - gmx:100813490 752.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0027 16 276419 279727 Ahy6g1325 6 19957858 19961195 hybridization