Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1317 ATGGGAAGAGCTCCATGCTGTGAGAAAGTGGGGTTGAAGAGAGGAAGATGGACAGCTGAAGAAGATAGGATATTGACTCAATACATAGAAGAACATGGGGAGGGTTCATGGAGGTCGTTGCCCAAGAATGCTGGACTCTTAAGGTGTGCTAAGAGTTGCAGACTCAGATGGATAAACTACCTCAGATCAGATGTCAAGAGAGGCAACATCACTCCCCAAGAGGAAGAGATCATTGTCAAGTTGCATGCTGTTCTTGGTAATAGGTGGTTAGTGATAGCAAGGCATTTACCAAGAAGAACATACAATGAGATAAAGAACTATTGGAACTCACGTTGGATCAGGAGAAAAATTTATTGCTTTATGAAATCTTTAAATGATTATTCCTCTTTCCCTCCCACCATTGACAATTGCTGCATTAAAAGCTTCCAAGAGAAGAGCACCTACTCGATCTACTGCACCTAA 462 0.4199 MGRAPCCEKVGLKRGRWTAEEDRILTQYIEEHGEGSWRSLPKNAGLLRCAKSCRLRWINYLRSDVKRGNITPQEEEIIVKLHAVLGNRWLVIARHLPRRTYNEIKNYWNSRWIRRKIYCFMKSLNDYSSFPPTIDNCCIKSFQEKSTYSIYCT* 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1317 153 CDD SANT 16 61 IPR001005 -
Ahy6g1317 153 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Ahy6g1317 153 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Ahy6g1317 153 SMART sant 66 114 IPR001005 -
Ahy6g1317 153 SMART sant 13 63 IPR001005 -
Ahy6g1317 153 Gene3D - 14 66 - -
Ahy6g1317 153 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 135 - -
Ahy6g1317 153 CDD SANT 71 112 IPR001005 -
Ahy6g1317 153 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Ahy6g1317 153 PANTHER MYB TRANSCRIPTION FACTOR 2 135 - -
Ahy6g1317 153 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Ahy6g1317 153 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Ahy6g1317 153 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Ahy6g1317 153 Gene3D - 71 111 - -
Ahy6g1317 153 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1317 Ahy-Chr6 19870209 19886799 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1317 1 126 MYB Transcription Factor Family AT5G49330 76.984 2.54e-66 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Ahy6g1317 Myb_DNA-binding 2.00E-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1317 K09422 - gmx:100805532 239.58