Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1311 ATGGGACTGGGGCTGTTCAGGATGTTCAACTGCTTCAGTAGTAAGCCCCGTGAAATTCCGATTATTCTAGGGTCGGAGACGCCGCCGCGGCCAAAGCAGAGGCAGCGGAAAGAAGAGTTGGGGGGCGGGGGGGAGTCAAAGATAGGAGGAATCCTGGGGAGGCCATACGTGGACATAAATACGATGTACGAGATGAAGAAGGAGCTGGGAAGAGGGCAGTCAGGGGTGACATACCTGTGCATAGAGAGGTCGACGGGGAGGGAATACGCATGCAAGACGATTGCAAGAGGGAAGCTGGTGAGGAAGGAAGAGATAGAAGACGTGAGGAGGGAGATAATGATACTGCAGCACCTGTCAGGGCAGCCCAACATAGTGGAGTTTCGTGGGGCATATGAAGACAGGCAGAACGTGCACGTGGTGATGGAGCTTTGCAGCGGAGGGGAGCTGTTTGACAGGATCATAGACAAGGGCACCTACTCCGAGAGGGAGGCTGCCCGCTTGATGAGGCAGATTGTCACCGTCGTCCATGTTTGCCACTTCATGGGCGTCATCCACAGAGACCTTAAGCCTGAGAACTTCTTGCTTGCCTCTAAGGACCCCCTTGCTCCCCTTAAAGCTACTGATTTTGGCGTCTCCGTTTTCATTGAGCAAGATAAAGTGTACAAAGAAATAGTTGGAAGTGCATACTATGTGGCTCCGGAGGTGCTGAAACGCAATTATGGAAAGGAGATAGATGTGTGGAGTGCTGGAGTCATTCTATACATTCTCTTAAGCGGGGTGCCCCCATTTTGGGGTGAAACTGAGAAGCAGATCTTTGATGCTATCTTGGAAGGGAAATTAGATCTAGAAAGCGCACCATGGCCTTCTATTTCAGCTGCTGCAAAAGATTTGATCAGGAAAATGTTAGCCTATGAACCTAAGAAACGCATCACAGCTTCTGCTGCCCTTGAACACCCTTGGATGAAGGAAGGGGGGGAAGCATCTGACAAGCCTATAGACAATGCGGTTTTAAGTAGGATGAAACAATTCAGAGCAATGAACAAGATGAAGAAACTTGCTTTAAAGGTGATAGCACAAAACCTTTCAGAGGAAGAAATCAAGGGCCTGAAACAAATGTTCAACAATATGGATACGGATCGCAGCGGCACAATCACTTTCGAAGAACTGAAATCTGGTTTGTCCAGATTGGGATCCAAGCTTTCTGAAACTGAAATAAGGCAGCTAATGGATGCTGCTGATGTTGATAAGAATGGAACCATTGACTATTATGAATTCATTACTGCCACCATGCATCGGCATAAACTTGAGAAGGAAGAAAATTTGTATAAGGCTTTTCAATACTTTGACAAGGATAGCAGCGGTTACATAACAAGAGATGAGCTTAGACATGCTTTGACTGAATATCAAATGGGAGATGAAGCAACTATTGATGAAGTCATTGATGACGTTGACACTGACAAGGATGGGAAGATCAACTACGAGGAGTTCGTGGCTATGATGAGGAAGGGGACATTGGATAATGAAGGGGTTATCGGCAAAGAGAGAACACGATAA 1554 0.4704 MGLGLFRMFNCFSSKPREIPIILGSETPPRPKQRQRKEELGGGGESKIGGILGRPYVDINTMYEMKKELGRGQSGVTYLCIERSTGREYACKTIARGKLVRKEEIEDVRREIMILQHLSGQPNIVEFRGAYEDRQNVHVVMELCSGGELFDRIIDKGTYSEREAARLMRQIVTVVHVCHFMGVIHRDLKPENFLLASKDPLAPLKATDFGVSVFIEQDKVYKEIVGSAYYVAPEVLKRNYGKEIDVWSAGVILYILLSGVPPFWGETEKQIFDAILEGKLDLESAPWPSISAAAKDLIRKMLAYEPKKRITASAALEHPWMKEGGEASDKPIDNAVLSRMKQFRAMNKMKKLALKVIAQNLSEEEIKGLKQMFNNMDTDRSGTITFEELKSGLSRLGSKLSETEIRQLMDAADVDKNGTIDYYEFITATMHRHKLEKEENLYKAFQYFDKDSSGYITRDELRHALTEYQMGDEATIDEVIDDVDTDKDGKINYEEFVAMMRKGTLDNEGVIGKERTR* 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1311 517 ProSiteProfiles EF-hand calcium-binding domain profile. 400 435 IPR002048 GO:0005509
Ahy6g1311 517 Gene3D - 329 505 - -
Ahy6g1311 517 ProSitePatterns EF-hand calcium-binding domain. 377 389 IPR018247 -
Ahy6g1311 517 Pfam Protein kinase domain 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1311 517 SUPERFAMILY EF-hand 360 501 IPR011992 -
Ahy6g1311 517 ProSitePatterns EF-hand calcium-binding domain. 484 496 IPR018247 -
Ahy6g1311 517 ProSitePatterns EF-hand calcium-binding domain. 413 425 IPR018247 -
Ahy6g1311 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 183 195 IPR008271 GO:0004672|GO:0006468
Ahy6g1311 517 Pfam EF-hand domain pair 369 429 IPR002048 GO:0005509
Ahy6g1311 517 Pfam EF-hand domain pair 438 501 IPR002048 GO:0005509
Ahy6g1311 517 ProSiteProfiles EF-hand calcium-binding domain profile. 471 506 IPR002048 GO:0005509
Ahy6g1311 517 ProSiteProfiles EF-hand calcium-binding domain profile. 364 399 IPR002048 GO:0005509
Ahy6g1311 517 MobiDBLite consensus disorder prediction 21 47 - -
Ahy6g1311 517 ProSiteProfiles EF-hand calcium-binding domain profile. 436 470 IPR002048 GO:0005509
Ahy6g1311 517 ProSiteProfiles Protein kinase domain profile. 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1311 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 507 - -
Ahy6g1311 517 ProSitePatterns Protein kinases ATP-binding region signature. 69 102 IPR017441 GO:0005524
Ahy6g1311 517 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 29 37 507 - -
Ahy6g1311 517 SMART efh_1 368 396 IPR002048 GO:0005509
Ahy6g1311 517 SMART efh_1 475 503 IPR002048 GO:0005509
Ahy6g1311 517 SMART efh_1 404 432 IPR002048 GO:0005509
Ahy6g1311 517 SMART efh_1 440 468 IPR002048 GO:0005509
Ahy6g1311 517 CDD STKc_CAMK 63 320 - -
Ahy6g1311 517 Gene3D Phosphorylase Kinase; domain 1 65 148 - -
Ahy6g1311 517 Gene3D Transferase(Phosphotransferase) domain 1 149 328 - -
Ahy6g1311 517 SUPERFAMILY Protein kinase-like (PK-like) 63 328 IPR011009 -
Ahy6g1311 517 SMART serkin_6 63 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1311 Ahy-Chr6 19776914 19781614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1311 46 504 EF-hand Containing Proteins AT3G20410 72.113 0.0 712
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Ahy6g1311 Pkinase 1.10E-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1311 K13412 - gmx:100816157 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0033 16 304730 309327 Ahy6g1311 6 19776914 19781614 hybridization