Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Ahy6g1300 | ATGGCTGAGACCACACCCAATCACACACAAACAGTTTCTGGATGGGCTGCTCATGATTCTTCTGGCAACATAACCCCCTACACTTTCAAAAGAAGAGACAACGGTGTTAATGACGTGAGCATAGAAATCTTGTACTGCGGGATTTGCCACACGGACATTCACTACGTTAAAAATGAATGGGGAATCACTAGGTACCCGGTTGTTCCGGGGCACGAGATCGTTGGGGTGGTAAGCAAGGTGGGGAGGGAAGTGAAGGGATTCAAAGAAGGAGACAGAGTAGGAGTGGGGTGTTTGGCAGCAACATGCTTGGAATGTGAGTATTGCAAGACCGATCAGGAGAACTACTGCGAGAAACTTGAGTTCACTTACAATGGAGTTTTCTGGGATGGTAGCATCACTTATGGTGGCTACTCAAAAATGCTGGTCGCTGATTACAGATACGTGGTACATGTGCCGGAGAATCTGCCAATGGACGCAACGGCACCACTGCTGTGTGCTGGAGTGACGGTGTTCAGTCCCTTGAAAGACCACGGTTTGGTTGAATCGCGAGGGAAAAGCATTGGCATTGTGGGCTTGGGTGGTCTTGGCCACGTGGCTGTCAAGTTTGCCAAGGCCTTTGGACACCATGTCACTGTCATAAGCACTTCTCCTTCCAAAGAGGCGGAGGCTAAGGAGCGTTTGGGTGCCGACCATTTCATAGTCAGCTCCAACCCCAAGCAAATGCAGGGTGCCAAGAGAACCCTTGATTTCATTTTGGACACTGTTTCAGCTGAGCACTCTCTTTTGCCCATTTTGGAATTGCTCAAAGTTAATGGCACTTTGTTTATTGTGGGTGCACCCGACAAGCCATTCCAATTGCCCGCATTCCCATTGATATTTGGGAAGAGATCAATCAAAGGTGGGATCATAGGAGGAATAAAAGAAACCCAGGAAATGTTGGACGTTTGTGGGAAGCACAACATCACATGTGACATTGAATTAATCACTCCAGACAGAATCAACGAAGCTCTTCAACGTCTTGCTAACAATGATGTCCGCTACCGTTTTGTCATTGACATCGCTGCTGCCACCTCTAATAACTAA | 1083 | 0.4774 | MAETTPNHTQTVSGWAAHDSSGNITPYTFKRRDNGVNDVSIEILYCGICHTDIHYVKNEWGITRYPVVPGHEIVGVVSKVGREVKGFKEGDRVGVGCLAATCLECEYCKTDQENYCEKLEFTYNGVFWDGSITYGGYSKMLVADYRYVVHVPENLPMDATAPLLCAGVTVFSPLKDHGLVESRGKSIGIVGLGGLGHVAVKFAKAFGHHVTVISTSPSKEAEAKERLGADHFIVSSNPKQMQGAKRTLDFILDTVSAEHSLLPILELLKVNGTLFIVGAPDKPFQLPAFPLIFGKRSIKGGIIGGIKETQEMLDVCGKHNITCDIELITPDRINEALQRLANNDVRYRFVIDIAAATSNN* | 361 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Ahy6g1300 | 360 | Gene3D | - | 166 | 323 | - | - | |
Ahy6g1300 | 360 | PANTHER | CINNAMYL ALCOHOL DEHYDROGENASE 6-RELATED | 1 | 356 | - | - | |
Ahy6g1300 | 360 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 155 | 321 | IPR036291 | - | |
Ahy6g1300 | 360 | SUPERFAMILY | GroES-like | 18 | 181 | IPR011032 | - | |
Ahy6g1300 | 360 | CDD | CAD1 | 14 | 352 | - | - | |
Ahy6g1300 | 360 | Pfam | Zinc-binding dehydrogenase | 194 | 315 | IPR013149 | - | |
Ahy6g1300 | 360 | Gene3D | - | 15 | 353 | - | - | |
Ahy6g1300 | 360 | Pfam | Alcohol dehydrogenase GroES-like domain | 37 | 150 | IPR013154 | - | |
Ahy6g1300 | 360 | PANTHER | ALDEHYDE REDUCTASE | 1 | 356 | - | - | |
Ahy6g1300 | 360 | ProSitePatterns | Zinc-containing alcohol dehydrogenases signature. | 70 | 84 | IPR002328 | GO:0008270|GO:0016491 | |
Ahy6g1300 | 360 | SMART | PKS_ER_names_mod | 19 | 351 | IPR020843 | GO:0016491 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Ahy6g1300 | Ahy-Chr6 | 19629024 | 19630614 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Ahy6g1300 | 14 | 354 | Monolignol Biosynthesis Gene Families | AT2G21730 | 57.310 | 1.09e-144 | 412 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Ahy6g1300 | K00083 | - | gmx:100820588 | 623.239 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Ahy16g0041 | 16 | 364738 | 366524 | Ahy6g1300 | 6 | 19629024 | 19630614 | hybridization |