Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1298 ATGTATAATAAGTTATTCTGTGACTGTGAGAAAATGGTGAGTGTTGTTGCCTTGGTTTTCTTGGGCACCATGTTTGCATTAGTAGCAGCAACAAATGGTGGACAGTATCCAGCATTATTTGCATTTGGAGATTCCATTCTTGATACCGGAAATAACAACAACCTTGCAACTTTAACCAAGTCTAATTTTCCTCCTTACGGAAGAGATTTTATTGGAGGAAAACCAACAGGAAGATTCTGTGATGGGAAAGTCCCATCAGATCTTATAGCGGGAGATCTTGGAATCAAAGGCACGTTACCTGCATATCTTGATCCAAATTTGCGGAATGAAGATCTTTCCACGGGTGTAAGCTTTGCCTCAGGTGGAACAGGAAATGATGATCTCACCGCTCAAACACAGGGTGCTTTATCACTATCGACACAAATGAAAAATTTCCAAGAGTGCATAGGAAGGCTAAAAGCATTTATGGGAGAAGAAAGAGCGAACTACATAATATCAAACAGCTTGTATCTGCTTTCATCAGGAAACAATGATATTGCCCTCACTTATTCTTCACCACTCAGAAGCAGCATTCCTTTCCCTTTATACGCTTCTCAATTAGTTGGCTGGACCTCGGATTTTCTCAAGCAACTATACGATGCCGGAGCAAGAAAAGTGTGGGTTCTGAGTACATTGCCATTGGGGTGCTTGCCGGGAGGTAGAACTGTAGCAGGAGGTCCTTTAAGATTGTGTTCTGATACTGTTAATAGAAAAGCTCAATTATTCAATGATCAATTAGCATCGGCTGTTAGTTCTTTACAAGGCACACTTTCTGGTTCTGCCTTTCAATTCATTGATATCTATGCTACACTGCTCAATATCATACAAAATCCTTTTAGCTCAGGGTTTCTAAATGTTGCAAATGGATGTTGTGGGACTGGACTGGTTGAGATTGGAGAGACATGTAAGTTAGCCCTTGGTTCCTGCCCAAATCCTGCAGCATATGTTTTCTGGGACGCTGGTCATCCAACTCAAAGAGCCTATGAGCTCATAGTCTCTTCTATACTGCCAAAATAG 1056 0.4129 MYNKLFCDCEKMVSVVALVFLGTMFALVAATNGGQYPALFAFGDSILDTGNNNNLATLTKSNFPPYGRDFIGGKPTGRFCDGKVPSDLIAGDLGIKGTLPAYLDPNLRNEDLSTGVSFASGGTGNDDLTAQTQGALSLSTQMKNFQECIGRLKAFMGEERANYIISNSLYLLSSGNNDIALTYSSPLRSSIPFPLYASQLVGWTSDFLKQLYDAGARKVWVLSTLPLGCLPGGRTVAGGPLRLCSDTVNRKAQLFNDQLASAVSSLQGTLSGSAFQFIDIYATLLNIIQNPFSSGFLNVANGCCGTGLVEIGETCKLALGSCPNPAAYVFWDAGHPTQRAYELIVSSILPK* 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1298 351 CDD SGNH_plant_lipase_like 37 351 IPR035669 -
Ahy6g1298 351 Gene3D SGNH hydrolase 27 350 IPR036514 -
Ahy6g1298 351 Pfam GDSL-like Lipase/Acylhydrolase 39 346 IPR001087 GO:0016788
Ahy6g1298 351 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 39 50 IPR008265 GO:0006629|GO:0016298
Ahy6g1298 351 SUPERFAMILY SGNH hydrolase 41 350 - -
Ahy6g1298 351 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 10 349 - -
Ahy6g1298 351 PANTHER GDSL ESTERASE/LIPASE EXL3 10 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1298 Ahy-Chr6 19605420 19607007 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1298 9 349 Pollen Coat Proteome AT1G75910 42.241 3.88e-83 254
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1298 - - aip:107646231 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0043 16 379571 381449 Ahy6g1298 6 19605420 19607007 hybridization
Ahy6g1298 6 19605420 19607007 Ahy17g1932 17 64361706 64365931 PCT
Ahy6g1298 6 19605420 19607007 Ahy8g0144 8 2701628 2705094 PCT