Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1286 ATGGGTTCCTTATTGTTTTCCTATTACTGTTTCTCTACACAGATTGCATTCATCTTGTTTCTATTTTGCTTGGATAAAGGAGCATTAGGGGCCAAGTTTACAATAATTAACAAGTGTGATTACACGGTGTGGCCTGGGATTCTCGCCAATGCTGGCAGCTCCGCATTGGATACCACCGGCTTCCACCCCCCATCCGGCGGGTCGAAGAGCTTTCAAGCCCCACCCAATTGGTCAGGCAGGTTTTGGGGCCGGACCGGCTGCAATTTTGACCCCAATACCCAACAGGGCACCTGCACCACAGGGGATTGTGGCTCCAACAAACTTGAATGCAATGGTGCCGGGGCAGACCCACCCGTAACACTAGCCGAGTTCACAATCGGGTCGGGTTCCCAATCCCAGGATTATTACGACGTCAGCCTGGTTGACGGATACAATCTTCCTATGATGGTGGATGCGGGTGGCGGGTCGGGTGAGTGTGGGTCAACGGGTTGCATAGCTGACCTGAACCGGCAATGCCCGAATGAGTTGAGGGTTAGTAACCGAGTGGCATGCAAGAGCGCGTGCGAAGCGTTTCAGAGGGCTGAATACTGCTGCAGCGGCACCTACGCTTCACCTGCCACATGCAAGCCTTCGGTTTACTCCACCATGTTCAAGAGCGCGTGCCCCAAATCGTATAGCTACGCATACGACGACCTTACGAGTACATTTACGTGTACGGGAGCTGATTATACCATCACATTCTGCCCTTCAACCACAAGCCAAAAATCAGCAAGAGTGTCACCACCAGCGCCACCTGAAACAGGAACAGGGGAGATGCCTATGATAGTGAACAGTTCATGGTTCTATGATATTTTTTATGGACTCTCGCCCAAGTCCTACTCTTGCCCAACCTTACTTATTGCCACTTTCACTATCCTAATTTTTCTCAATTTGCAATCCTCATAG 945 0.5079 MGSLLFSYYCFSTQIAFILFLFCLDKGALGAKFTIINKCDYTVWPGILANAGSSALDTTGFHPPSGGSKSFQAPPNWSGRFWGRTGCNFDPNTQQGTCTTGDCGSNKLECNGAGADPPVTLAEFTIGSGSQSQDYYDVSLVDGYNLPMMVDAGGGSGECGSTGCIADLNRQCPNELRVSNRVACKSACEAFQRAEYCCSGTYASPATCKPSVYSTMFKSACPKSYSYAYDDLTSTFTCTGADYTITFCPSTTSQKSARVSPPAPPETGTGEMPMIVNSSWFYDIFYGLSPKSYSCPTLLIATFTILIFLNLQSS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1286 314 Pfam Thaumatin family 37 249 IPR001938 -
Ahy6g1286 314 Gene3D Thaumatin 31 249 IPR037176 -
Ahy6g1286 314 PANTHER THAUMATIN-LIKE PROTEIN 1 15 262 - -
Ahy6g1286 314 ProSiteProfiles Thaumatin family profile. 30 249 IPR001938 -
Ahy6g1286 314 CDD TLP-PA 32 248 - -
Ahy6g1286 314 SUPERFAMILY Osmotin, thaumatin-like protein 32 250 IPR037176 -
Ahy6g1286 314 SMART tha2 33 249 IPR001938 -
Ahy6g1286 314 PRINTS Pathogenesis-related protein signature 80 91 IPR001938 -
Ahy6g1286 314 PRINTS Pathogenesis-related protein signature 134 150 IPR001938 -
Ahy6g1286 314 PRINTS Pathogenesis-related protein signature 239 248 IPR001938 -
Ahy6g1286 314 PRINTS Pathogenesis-related protein signature 32 44 IPR001938 -
Ahy6g1286 314 PANTHER OS03G0233200 PROTEIN 15 262 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1286 Ahy-Chr6 19412144 19414983 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1286 11 289 Receptor kinase-like Gene Family AT5G38280 44.097 2.85e-74 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1286 - - gmx:100786772 481.485