Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1279 ATGGCCATCTCCAGAACTCTTCTTGCCGCAATCCTTATTTCTATCCTCATTCTTCAGATAGTTGAGTCAGCAACAATCGATTGTGATAGTGAATGCAAGAGGAGGTGTGCATTATCATCAAGGCCGAACCTATGTGAGAGAGCCTGCGGCACTTGCTGTAACCGCTGCAATTGTGTGCCGTCGGGCACTTCCGGCCACTACGAGGAGTGCCCTTGTTATGCCAATCAAACCACCCATGGCGGCGTACATAAATGTCCTTAA 261 0.4904 MAISRTLLAAILISILILQIVESATIDCDSECKRRCALSSRPNLCERACGTCCNRCNCVPSGTSGHYEECPCYANQTTHGGVHKCP* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1279 86 PANTHER SNAKIN-2-LIKE 20 86 - -
Ahy6g1279 86 Pfam Gibberellin regulated protein 27 86 IPR003854 -
Ahy6g1279 86 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 20 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1279 Ahy-Chr6 19317979 19318644 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1279 - - gmx:100306171 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0060 16 547843 548923 Ahy6g1279 6 19317979 19318644 hybridization
Ahy17g2269 17 109591701 109592437 Ahy6g1279 6 19317979 19318644 PCT
Ahy8g0128 8 2367047 2368017 Ahy6g1279 6 19317979 19318644 PCT