Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1277 ATGATCCGATTCATTCTGCTGCAGAACAGGCAGGGGAAAACCCGTTTGGCGAAATACTATGTCCCTCTCGAGGATTCCGAGAAGCACAAGGTCGAATACGAGGTTCATCGCCTCGTTGTTAATCGAGACCCCAAATACACTAATTTCGTTGAGTTTAGGACTCACAAGGTAATATATAGGAGATATGCTGGCTTGTTCTTCTCTCTATGTGTTGACATTACTGATAATGAGCTTGCTTACTTGGAGTGCATCCATCTATTTGTGGAGATTTTGGATCACTTCTTTAGCAATGTGTGTGAGCTTGACTTGGTCTTCAACTTCCATAAGGTATATCTTATACTTGATGAATTCATTCTAGCGGGTGAATTGCAAGAAACTAGTAAGAAGGCTATCATAGAGAGAATGGGGGAACTAGAAAAACTTGAGTAA 429 0.4103 MIRFILLQNRQGKTRLAKYYVPLEDSEKHKVEYEVHRLVVNRDPKYTNFVEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAGELQETSKKAIIERMGELEKLE* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1277 142 Gene3D - 1 142 - -
Ahy6g1277 142 PIRSF AP_complex_sigma 1 142 IPR016635 GO:0015031
Ahy6g1277 142 Pfam Clathrin adaptor complex small chain 1 141 IPR022775 -
Ahy6g1277 142 PANTHER AP COMPLEX SUBUNIT SIGMA 2 142 - -
Ahy6g1277 142 CDD AP2_sigma 1 141 IPR027156 GO:0016192|GO:0030122|GO:0035615|GO:0072583
Ahy6g1277 142 PANTHER ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY 2 142 IPR016635 GO:0015031
Ahy6g1277 142 SUPERFAMILY SNARE-like 1 136 IPR011012 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1277 Ahy-Chr6 19307793 19310214 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1277 K11827 - mnt:21399120 288.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0062 16 557351 559713 Ahy6g1277 6 19307793 19310214 hybridization