Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1265 ATGTCGTCGAAATGCAGCAAGATTCGCCACATTGTGAGGCTTCGTCAGATGCTGCGTCGCTGGCGCATCAAGGCGCGCATGTCCTCCGCTGCTAATAACCGCTCAAGCTCTTCTCCGCCGTCTGATGTTCCCGCTGGACACGTGGCGGTCTGCGTCGGCATCAACTGCACCAGATTCGTTGTGCGAGCTACTCACCTCAACCACCCTGTGTTCCAGAAGCTTCTAGTTCAGGCGGAAGAAGAGTACGGCTTCGCCAACCACGGTCCTTTGGCTATTCCCTGCGACGAAGCACTCTTTGAAGATGTTATCCGGTTCATTTCCCGCTCTGAGTCTGGATCCGGTTCGAACCGATTCTTGAACCTTGATGACTCTCAGAGACACTGCCACGTCGGAATCAGGAACAACCTTGATTTCTGGAAGCAGGAATCTCGACCGCTGCTCCACGGCTTCACTGACAAGACCATTTGGTAG 471 0.5435 MSSKCSKIRHIVRLRQMLRRWRIKARMSSAANNRSSSSPPSDVPAGHVAVCVGINCTRFVVRATHLNHPVFQKLLVQAEEEYGFANHGPLAIPCDEALFEDVIRFISRSESGSGSNRFLNLDDSQRHCHVGIRNNLDFWKQESRPLLHGFTDKTIW* 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1265 156 PANTHER SMALL AUXIN-UP RNA-RELATED 4 149 - -
Ahy6g1265 156 Pfam Auxin responsive protein 13 105 IPR003676 GO:0009733
Ahy6g1265 156 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 4 149 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1265 Ahy-Chr6 18986268 18987718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1265 4 155 Calmodulin-binding Proteins AT4G34750 54.140 4.18e-51 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1265 K14488 - qsu:112012848 233.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0078 16 711879 713166 Ahy6g1265 6 18986268 18987718 hybridization
Ahy6g1265 6 18986268 18987718 Ahy17g2293 17 110775929 110777086 PCT
Ahy6g1265 6 18986268 18987718 Ahy8g0114 8 2135103 2136244 PCT
Ahy17g2293 17 110775929 110777086 Ahy6g1265 6 18986268 18987718 PCT
Ahy8g0114 8 2135103 2136244 Ahy6g1265 6 18986268 18987718 PCT