Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1216 ATGGAATCTACCAACCATAATAATCTCCTTCATCATCATCATCTTCTTCAAGATCAACAAAAACCACATGATAATAATGTTGAGGCTTGTTCTTCATCTTGCTATGGTGTTGGAAGCAGCCATTCTTGGAGCTCACCAAATACAACTATGGATGGTGATGATAACTTGAAGATCCAAGATTATTTAGGTTACAATAATAATGAAGAGAACAAAGATATGATGATGAGTAATGGGAGGCTCTTAATGAAGAACCTTTCTCAAGAAGAGCAATATTACTCCACTTCTTCCACTAATGCACAAAGTCATTATCATAATTATATTGGTGGTAATAATAACAATAATAATATTAATAAGGCCTATATTAGTATATATCCAACCATAAATGTCTCAAATTTGAACCACCCATCAGCAGAAATTTCTTCAAGCATAATGCATCATCATCAGCCCTTAGATCTGTTAACCTCAACAACAACATCATCATCTTCAAAGGATCATCATCATCATCATGGTCTTAATGGTCAATTATTTACAGAAAACCTTTTCCATAATATTACTGGTCTTGATGATCATCATATGCAGCACTCCACTACTAGTATTCCATCACAACACTTCACCAATAATAATAATGGCATGATGGTAGAAACAAAAAGATCTTCAAGCACTTTGATGGAGTCATCAAATGCATCGAAGAAATCAAGACCCCAATCATCACGCTCTTCATGCCAACACCTTAAGATTAGAAAGGAGAAATTAGGAGATAGGATTGCGGCTCTTCAGCAATTGGTGGCTCCTTTTGGCAAGACAGATACAGCATCCGTACTTCTAGAGGCAATTGGATACATTAAATTCCTTCAAAGCCAAGTGGAGACATTAAGTGTTCCATATATGAAGTCATCAAGGAACCAAATCAGCAGAGGACTCATAATGAGGCAAGGGGTTTCATCAAGAGATAATATTATGAACTCGGAGGCAAAGCATGAAGACCTTAGAAGCCGAGGCCTCTGCCTTGTACCAATGTCGTGCATGGCATACATAGCCGGCGATGATGGTGGCAGTTGTGGAGCGTGGCAGCAACCGCCAAATTTTGGCGGCCCAACCTAA 1101 0.3833 MESTNHNNLLHHHHLLQDQQKPHDNNVEACSSSCYGVGSSHSWSSPNTTMDGDDNLKIQDYLGYNNNEENKDMMMSNGRLLMKNLSQEEQYYSTSSTNAQSHYHNYIGGNNNNNNINKAYISIYPTINVSNLNHPSAEISSSIMHHHQPLDLLTSTTTSSSSKDHHHHHGLNGQLFTENLFHNITGLDDHHMQHSTTSIPSQHFTNNNNGMMVETKRSSSTLMESSNASKKSRPQSSRSSCQHLKIRKEKLGDRIAALQQLVAPFGKTDTASVLLEAIGYIKFLQSQVETLSVPYMKSSRNQISRGLIMRQGVSSRDNIMNSEAKHEDLRSRGLCLVPMSCMAYIAGDDGGSCGAWQQPPNFGGPT* 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1216 366 MobiDBLite consensus disorder prediction 192 242 - -
Ahy6g1216 366 Coils Coil 241 261 - -
Ahy6g1216 366 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 245 297 IPR036638 GO:0046983
Ahy6g1216 366 Gene3D - 242 305 IPR036638 GO:0046983
Ahy6g1216 366 CDD bHLH_AtbHLH_like 247 292 IPR045239 -
Ahy6g1216 366 PANTHER OS01G0105700 PROTEIN 45 348 - -
Ahy6g1216 366 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 235 284 IPR011598 GO:0046983
Ahy6g1216 366 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 45 348 - -
Ahy6g1216 366 MobiDBLite consensus disorder prediction 192 241 - -
Ahy6g1216 366 SMART finulus 245 290 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1216 Ahy-Chr6 18002956 18008826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1216 120 366 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G27660 41.877 1.83e-47 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1216 - - aip:107647881 616.69