Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1208 ATGGCGAAGGAGCAAATGCAAGTTCTGAATGCACTTGATGTGGCAAAAACACAATGGTATCATTTCACTGCAATAATCATAGCTGGAATGGGGTTCTTCACCGATGCATACGATCTATTCTGCATATCCCTTGTGACAAAGTTGCTAGGCCGCATATACTACCACGTTGATGGTGCGGAAAAGCCCGGTACATTGCCTCCTAACGTATCAGCTGCTGTAAATGGTGTAGCTTTCTGTGGAACGTTGTCAGGACAACTCTTCTTTGGATGGCTTGGAGATAAGTTAGGCCGAAAAAAGGTCTATGGCATGACTCTGATGATGATGGTAATATGCTCCATTGGTTCTGGCCTTTCCTTTGGGCATAGTCCGAAATCCGTCATGGCAACTCTCTGCTTCTTCCGGTTTTGGCTTGGTTTTGGTATTGGTGGAGATTATCCGCTTTCTGCTACCATAATGTCCGAGTATTCTAACAAGAAGACTCGTGGTGCTTTCATTGCCGCGGTCTTTGCTATGCAAGGTTTTGGAATCTTGGCAGGTGGTATATTTGCGATCATAATTTCAGCTTCATTTAGAGACAGGTTTAATGCTGCACCCTATGAGGTTGATCCAGTTGGTTCAACTGTTCCACAAGCAGATTATGTTTGGAGAATAATTGTGATGGTTGGAGCACTCCCGGCTGCATTGACTTATTACTGGCGTATGAAGATGCCGGAAACTGCCCGTTATACTGCCTTAGTTGCAAAGAATCAAGAGCAAGCTGCAGCAGATATGTCTAAGGTTCTGCAGGTGGAGATTCAAGCTGAGCCAAGGAAGGAGGAGCAGGAAAAGGCTAAATATGCCTTGTTCTCAAAGGAGTTCCTTAGTCGCCATGGTCTACATCTGCTCGGCACAACAACCACATGGTTCTTGCTTGACATTGCATTTTACAGCCAGAATCTTTTCCAAAAAGATATCTTCAGCGCAGTTGGTTGGATCCCTCCTGCAAAAACCATGAATGCCCTTGAGGAGGTTTACAGAATTGCAAGGGCTCAAACACTTATTGCTCTTTGCAGTACAGTTCCTGGCTATTGGTTTACAGTGGCTTTCATTGACAAGATCGGAAGATTCGCCATCCAATTGATGGGGTTCTTCTTTATGACTGTCTTCATGTTTGCTCTCGCCATTCCTTACGACCACTGGACACACAAGGAGAATCGCATTGGATTTGTGGTGATGTATTCCTTAACTTTCTTCTTCGCAAATTTCGGGCCTAACGCCACCACGTTTGTGGTGCCGGCAGAGGTTTTCCCTGCTAGGTTCCGGTCTACATGCCATGGCATATCATCGGCATCCGGGAAGCTCGGAGCTATCGTAGGAGCATTTGGGTTCTTGTATTTGGCACAAAACAAGGACAAGAGCAAAGCAGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATGCACTGATTGTGTTAGGTGTAGTTAACATTTTAGGATTCTTCTTTACATTCTTGGTGCCTGAGGCAAAGGGAAAATCTTTGGAGGAGATGTCAGGTGAGAATGAAGAGGAAGAAGTACCTCCCGAACTGTCAGAACAGCAGAGTTCTTACAGCAACAGAACTGTTCCATATGTTTAG 1617 0.4527 MAKEQMQVLNALDVAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRIYYHVDGAEKPGTLPPNVSAAVNGVAFCGTLSGQLFFGWLGDKLGRKKVYGMTLMMMVICSIGSGLSFGHSPKSVMATLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIIISASFRDRFNAAPYEVDPVGSTVPQADYVWRIIVMVGALPAALTYYWRMKMPETARYTALVAKNQEQAAADMSKVLQVEIQAEPRKEEQEKAKYALFSKEFLSRHGLHLLGTTTTWFLLDIAFYSQNLFQKDIFSAVGWIPPAKTMNALEEVYRIARAQTLIALCSTVPGYWFTVAFIDKIGRFAIQLMGFFFMTVFMFALAIPYDHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEVFPARFRSTCHGISSASGKLGAIVGAFGFLYLAQNKDKSKADAGYPAGIGVKNALIVLGVVNILGFFFTFLVPEAKGKSLEEMSGENEEEEVPPELSEQQSSYSNRTVPYV* 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1208 538 Pfam Sugar (and other) transporter 26 511 IPR005828 GO:0016021|GO:0022857|GO:0055085
Ahy6g1208 538 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
Ahy6g1208 538 CDD MFS_PhT 25 503 - -
Ahy6g1208 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 1 518 - -
Ahy6g1208 538 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-7-RELATED 1 518 - -
Ahy6g1208 538 MobiDBLite consensus disorder prediction 508 538 - -
Ahy6g1208 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 504 IPR020846 GO:0022857
Ahy6g1208 538 TIGRFAM 2A0109: phosphate:H+ symporter 11 513 IPR004738 GO:0005315|GO:0006817|GO:0016021
Ahy6g1208 538 MobiDBLite consensus disorder prediction 523 538 - -
Ahy6g1208 538 Gene3D MFS general substrate transporter like domains 20 527 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1208 Ahy-Chr6 17859512 17862581 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1208 1 518 Inorganic Solute Cotransporters AT3G54700 84.363 0.0 926
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1208 K08176 - gmx:100803626 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0126 16 1231947 1234997 Ahy6g1208 6 17859512 17862581 hybridization
Ahy6g1208 6 17859512 17862581 Ahy12g1273 12 42325035 42327867 PCT
Ahy12g0917 12 18471789 18473726 Ahy6g1208 6 17859512 17862581 PCT
Ahy2g0785 2 14379321 14381209 Ahy6g1208 6 17859512 17862581 PCT