Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1201 ATGACAGGTTCAGGTACACCTTGTGGAGCCTGCAAATTCTTGAGGAGAAAATGCGTGAGAGGTTGTGTTTTTGCACCTTACTTTTGCCATGAACAAGGTGCTACCCATTTTGCAGCCATTCATAAGGTCTTTGGTGCAAGCAATGTCTCCAAGCTCCTTGCTCATCTTCCTGTCGACCATCGCTGCGAAGCCGCCCTCACCATCTCATTCGAAGCTCAGGCAAGGCTTCAAGATCCAATCTATGGCTGCGTCGCACATATTTTTGCCCTACAACAACAGGTTATGAATTTACAAGCACAGTTGGCTTATTTAAGGGAACAAGCTGCACAGAGTTGTAATCTGAACCCTAATACTACTACTGCTCTTTACCCCCATCACCAAGATCTTGGAAATTCGTTCCAGATGGAGAATTCCACCATGGTTCCACACTTTCTTTCTAATAGTTCATCTAATTATCCCTCATCAGCAACACAACAATACCATGGGAATACTCGTAGTAGTCTCATGATGGAATCAAACCCTATTGAGAACTACGAAAATTCAAGCATCTCCTTTAATTCATATAGCTTTGATGAGACTTGTGACACGCTGTTCTTTGACATGAAAAGTGGATCAACTTCAATAAGTGGTCTTTGA 636 0.4277 MTGSGTPCGACKFLRRKCVRGCVFAPYFCHEQGATHFAAIHKVFGASNVSKLLAHLPVDHRCEAALTISFEAQARLQDPIYGCVAHIFALQQQVMNLQAQLAYLREQAAQSCNLNPNTTTALYPHHQDLGNSFQMENSTMVPHFLSNSSSNYPSSATQQYHGNTRSSLMMESNPIENYENSSISFNSYSFDETCDTLFFDMKSGSTSISGL* 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1201 211 Coils Coil 87 107 - -
Ahy6g1201 211 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 185 - -
Ahy6g1201 211 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
Ahy6g1201 211 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 185 - -
Ahy6g1201 211 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1201 Ahy-Chr6 17688963 17690371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1201 7 192 AS2 family AT3G58190 55.612 7.00e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Ahy6g1201 LOB 6.00E-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1201 K13945 K13944 gmx:100816960 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0131 16 1325391 1326708 Ahy6g1201 6 17688963 17690371 hybridization
Ahy6g1201 6 17688963 17690371 Ahy12g0867 12 16808155 16809843 PCT
Ahy6g1201 6 17688963 17690371 Ahy2g0735 2 12934570 12936176 PCT
Ahy12g0867 12 16808155 16809843 Ahy6g1201 6 17688963 17690371 PCT
Ahy2g0735 2 12934570 12936176 Ahy6g1201 6 17688963 17690371 PCT