Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1188 ATGGAGGAAGTTGAAGAAGCTAACAGAGCTGCTGTTGAGAGCTGCCATAGAGTTTTAACAGTGTTGTCTCAGCCTCAGGATCAAGTTCATTATAGGAATTTAATGGTAGAAACTGGTGAAGCTGTGATGAAGTTCAAGAAAGTTGTTTCCTTGCTTAGTAGTAGTTTGGGTCATGCAAGAGTTAGGAAGCATAAGAAGCTTCAAGTACCATTTTCTCAAAGCATCCTCTTGGATAGCCCAGTTTGCATAAGAAAAAATCATCAATCTAAGTACTTGAAATTTCCTCAGGCTGATTTTCATGATAATTCAGCTCAGGAACTGGGTTTAACAGTAGGGAAAGCGCTAACTCTGGCTGCGAAACCGGCCTTCGAATTGAGCTCCAATGGCAATGGGAATGGGAAGAGTCCTCTTCAACTTGCTCAACAACTCTCATCAACACACTATCATATTCTTCAGCAGCAGCAGCAACAACAAAGGGCATTGCTGCTGCATCATCAGCAGCAGCAGCAACAAATGAAACATCAAGCCGAAATTATGTACAGAAGGAACAACATTAACAATAGCAATAACTGCAGCAGCAACAACAACAGTGTCATAAATCTGAATTTTGATAATAGCTCTAGCTGCACACCAACAATGTCGTCTACTAGGTCTTTTATTTCTTCCCTTAGCATAGATGGGAGCGTGGCGAACATGGAAGGAAGCGCCTTCCATCTAATCGGAGCTGCGCGCTCTTCTGATCAGAATTCCCAACAGCACAAGAGAAAATGTTCTGCTAGAGGCGACGAGGCGAGCGGTGGCAAATGCCATTGCTCAAAGAAGAGGAAACATAGAGTGAAGAGATCAATCAAGGTGCCTGCCATCAGCAACAAACTTGCAGATATCCCTCCTGATGATTATTCGTGGAGGAAGTACGGGCAGAAGCCCATCAAGGGGTCTCCACACCCCAGGGGGTATTATAAGTGCAGCAGCATGAGAGGGTGCCCTGCTAGGAAGCATGTTGAGAGGTGCTTGGAAGAGCCTTCAATGCTAATAGTTACCTATGAAGGGGAGCACAACCACCCTAAATTATCAACACAATCTGCAAACGCATGA 1095 0.4447 MEEVEEANRAAVESCHRVLTVLSQPQDQVHYRNLMVETGEAVMKFKKVVSLLSSSLGHARVRKHKKLQVPFSQSILLDSPVCIRKNHQSKYLKFPQADFHDNSAQELGLTVGKALTLAAKPAFELSSNGNGNGKSPLQLAQQLSSTHYHILQQQQQQQRALLLHHQQQQQQMKHQAEIMYRRNNINNSNNCSSNNNSVINLNFDNSSSCTPTMSSTRSFISSLSIDGSVANMEGSAFHLIGAARSSDQNSQQHKRKCSARGDEASGGKCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEEPSMLIVTYEGEHNHPKLSTQSANA* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1188 364 ProSiteProfiles WRKY domain profile. 291 357 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g1188 364 MobiDBLite consensus disorder prediction 244 275 - -
Ahy6g1188 364 Pfam Plant zinc cluster domain 254 294 IPR018872 -
Ahy6g1188 364 Gene3D WRKY domain 281 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g1188 364 SUPERFAMILY WRKY DNA-binding domain 294 356 IPR036576 GO:0003700|GO:0006355|GO:0043565
Ahy6g1188 364 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 363 IPR044810 GO:0003700
Ahy6g1188 364 MobiDBLite consensus disorder prediction 249 269 - -
Ahy6g1188 364 Pfam WRKY DNA -binding domain 298 355 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g1188 364 SMART WRKY_cls 296 356 IPR003657 GO:0003700|GO:0006355|GO:0043565
Ahy6g1188 364 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1188 Ahy-Chr6 17402413 17405026 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1188 1 361 WRKY Transcription Factor Family AT2G30590 55.779 1.65e-119 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Ahy6g1188 WRKY 3.70E-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1188 - - gmx:100170681 473.011