Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1161 ATGGAGCCTTCAATTTACCAAAGTGAGCTGAATCTGGAGGCAACAGAATTAAGGTTAGGTTTACCTGGAAGAACCAACAACAAGAGGTCTTCACCTGAAGACAGATCCAGGAGCATCAGCATCAGCATCAGCAAGAGCAGCAGCGTTGACTCTAGTGGTCCTAGTAACGCTACCGATCATGATGACGACGATGATGACCATCAAAATTCTGTCCAACCTGCAAAGGTTCAAGTAGTAGGGTGGCCACCAGTTAGATCGTTTAGGAGGAACAGTATGCAGCAACAAAAACAGAAGAAGGATGAACACAACAACAATAATGGTGATGGATCTGCGATGTACGTGAAGGTGAGCATGGCCGGTGCACCTTACTTGAGGAAGATAGATCTGAACGTTTACAATAGTTACTCCCAACTCCTCAACGCCCTCCAGAATTTGTTCAAATGCACTTTTGGGGAATATTCAGAGAGAGAAGGATATAACGGATCTGAATATGCTCCTACTTATGAAGATAAGGATGGTGATTGGATGCTCGTTGGAGACGTTCCATGGGACATGTTCACGTGTTCCTGCAAGAGGCTTAGGATTGTGAAAGGATCAGAAGCAAAGGGGTTGGCTTCTTTATGA 624 0.4487 MEPSIYQSELNLEATELRLGLPGRTNNKRSSPEDRSRSISISISKSSSVDSSGPSNATDHDDDDDDHQNSVQPAKVQVVGWPPVRSFRRNSMQQQKQKKDEHNNNNGDGSAMYVKVSMAGAPYLRKIDLNVYNSYSQLLNALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWDMFTCSCKRLRIVKGSEAKGLASL* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1161 207 PANTHER AUXIN-INDUCED PROTEIN 5 205 - -
Ahy6g1161 207 SUPERFAMILY CAD & PB1 domains 104 195 - -
Ahy6g1161 207 ProSiteProfiles PB1 domain profile. 111 203 IPR000270 GO:0005515
Ahy6g1161 207 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 5 205 IPR003311 GO:0005634|GO:0006355
Ahy6g1161 207 Pfam AUX/IAA family 15 205 IPR033389 -
Ahy6g1161 207 MobiDBLite consensus disorder prediction 36 55 - -
Ahy6g1161 207 Gene3D - 105 207 - -
Ahy6g1161 207 MobiDBLite consensus disorder prediction 56 70 - -
Ahy6g1161 207 MobiDBLite consensus disorder prediction 17 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1161 Ahy-Chr6 16940268 16941568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1161 90 206 B3 DNA Binding Superfamily AT2G46530 32.479 1.89e-11 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Ahy6g1161 AUX_IAA 1.30E-61 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1161 K14484 - gmx:100792134 263.077