Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1158 ATGGACACCCACTCCTCTCACGGCGCTGGGCCCCTCCGTTCCCGGAGCTCGCAGTCCCCTTCTCCCTCTCACTCGGCCTCCGCCTCCGCCACCTCTTCCATCCACAAGCGCAAGCTCGCGTCTGAAGACCACGCGCCACCCTTTCCCCCTTCCTCCTTCTCCGCCGAGACCCGCGACGGCGCTCTCACTTCCAACGACGACCTCGAGAGCATCTCCGCCCGCGGCGCAGACTCGGATTCCGACGCTGACGACTCCGAGGACGCAGTCGTCGACGACGACGAGGACGACTACGACAATGACTCCTCCATGCGCAACTTCACCGCCGCCAGGCTTGACGGAAGCGCTGGTGCCGGTGGAGCCTCCGCACCGCGCAACACCAAGCTCAAGACCGAAAACTCAGTCACCGTGAAGATTGAGAGCTCCGACGGTGTCAACAAGGACGCTGGCGTAGCTGGAAATTCCGCCGCCGTGGGCACAGTTGCCACCGCCGGATCCGTCCCAGGTATCGTGGTGAAGGAAGATGTTAGCAAGATATTTACGGATAATTTGCAGACCAGTGGAGCTTACAGTGCGAGAGAAGAGAGTCTGAAGAAAGAGGAGGAAGCGGGAAGGCTCAAATTTGTGTGCTACTCAAATGACGGTGTTGATGAGCATATGGTTTGGTTAATAGGATTGAAGAATATATTTGCTAGGCAACTTCCCAATATGCCAAAGGAGTACATTGTCCGACTTGTTATGGATAGGAGCCATAAGTCTGTAATGGTTATAAGGCGGAATCATGTTGTTGGAGGCATTACATATCGGCCATATGTAAGCCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAAGGTTATGGTACTAGATTGATGAATCACTTAAAACAGCATGCACGTGATGTAGATGGGCTGACACATTTTTTAACTTATGCTGACAACAATGCTGTTGGATACTTTATCAAACAGGGATTTACGAAGGAGATTCACTTGGAGAAAGATAGATGGCAAGGGTATATAAAAGACTATGATGGAGGAATTCTCATGGAATGCAAGATTGATCCAAAGCTCCCTTATATCGATCTATCAACAATGATTCGTCGTCAACGACAGGCTATTGATGAAAAGATCAGAGAGTTGTCAAATTGTCACATTGTTTATGCTGGCATTGATTTTCAGAAGAAAGAAGCTGGAATTCCTAAAAAAATTGTCAAAGTTGAGGACATCCCTGGATTGAGAGAGGCTGGTTGGACCCCTGATCAGTGGGGTCATTCAAGATTCAGACTAAGCAACGCTACAGACAATGCTACAAATATGAAGCATTTGACAGCGTATATGCGTTCCCTTCTGAAGTCAATGCATGATCATACTGATGCTTGGCCATTCAAGGAACCAGTTGATGCACGAGATGTTCCTGATTATTATGACATAATTAAAGATCCAATAGATCTGAAGACAATGACTAAGAGGGTGGAATCAGAACAATATTATGTGACATTTGAGATGTTTGTTGCTGATGTGAAGAGAATGTTTCAGAATGCACGCACATATAACTCTCCTGAAACCATATATTACAAATGTGCTACAAGGTTAGAATTACATTTTCAGAGTAAAGTGACATCTGGTGTCCAATCTGGTACCAAAATTCAGTAG 1668 0.4712 MDTHSSHGAGPLRSRSSQSPSPSHSASASATSSIHKRKLASEDHAPPFPPSSFSAETRDGALTSNDDLESISARGADSDSDADDSEDAVVDDDEDDYDNDSSMRNFTAARLDGSAGAGGASAPRNTKLKTENSVTVKIESSDGVNKDAGVAGNSAAVGTVATAGSVPGIVVKEDVSKIFTDNLQTSGAYSAREESLKKEEEAGRLKFVCYSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYVSQKFGEIAFCAITADEQVKGYGTRLMNHLKQHARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYIDLSTMIRRQRQAIDEKIRELSNCHIVYAGIDFQKKEAGIPKKIVKVEDIPGLREAGWTPDQWGHSRFRLSNATDNATNMKHLTAYMRSLLKSMHDHTDAWPFKEPVDARDVPDYYDIIKDPIDLKTMTKRVESEQYYVTFEMFVADVKRMFQNARTYNSPETIYYKCATRLELHFQSKVTSGVQSGTKIQ* 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1158 555 MobiDBLite consensus disorder prediction 1 35 - -
Ahy6g1158 555 SUPERFAMILY Bromodomain 434 544 IPR036427 GO:0005515
Ahy6g1158 555 CDD Bromo_gcn5_like 447 544 - -
Ahy6g1158 555 PANTHER GH11602P 1 555 IPR037800 GO:0004402
Ahy6g1158 555 Gene3D - 201 365 - -
Ahy6g1158 555 MobiDBLite consensus disorder prediction 1 134 - -
Ahy6g1158 555 ProSiteProfiles Bromodomain profile. 459 530 IPR001487 GO:0005515
Ahy6g1158 555 Gene3D - 436 553 IPR036427 GO:0005515
Ahy6g1158 555 MobiDBLite consensus disorder prediction 80 99 - -
Ahy6g1158 555 CDD NAT_SF 252 306 - -
Ahy6g1158 555 PANTHER BNAC04G26160D PROTEIN 1 555 - -
Ahy6g1158 555 Pfam Bromodomain 452 534 IPR001487 GO:0005515
Ahy6g1158 555 MobiDBLite consensus disorder prediction 56 71 - -
Ahy6g1158 555 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 214 364 IPR016181 -
Ahy6g1158 555 SMART bromo_6 440 549 IPR001487 GO:0005515
Ahy6g1158 555 PRINTS Bromodomain signature 462 475 IPR001487 GO:0005515
Ahy6g1158 555 PRINTS Bromodomain signature 476 492 IPR001487 GO:0005515
Ahy6g1158 555 PRINTS Bromodomain signature 511 530 IPR001487 GO:0005515
Ahy6g1158 555 ProSitePatterns Bromodomain signature. 464 522 IPR018359 -
Ahy6g1158 555 Pfam Acetyltransferase (GNAT) family 252 330 IPR000182 GO:0016407
Ahy6g1158 555 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 212 359 IPR000182 GO:0016407
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1158 Ahy-Chr6 16905174 16911026 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Ahy6g1158 Bromodomain 1.40E-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1158 K06062 - gmx:100791610 853.203
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0167 16 1768054 1773614 Ahy6g1158 6 16905174 16911026 hybridization