Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1137 ATGGAGCAGTATGAAATTCTAGAACAGATTGGCAAAGGTGCCTTTGGTTCTGCTCTTCTTGTCAAGCACAAGCATGAAAAGAAAAAATATGTCCTCAAGAAGATTCGCCTTGCTCGCCAGACTGACAGAGCCCGAAGGTCTGCCCATCAGGAGATGGAGCTTATATCTAAAGTTCAAAATCCATTTATAGTGGAGCATAAAGATTCCTGGGTAGAAAGGGGTTGTTTTGTATGTATTGTCTTAAGTTATTGTGAAGGAGGAGATATGGCTGAAGCTATAAAAAAGGCTAATGGTGTTCATTTTCCTGAAGAGAAACTTTGTAAGTGGCTTGTTCAACTGCTGATGGCCCTTGATTACTTGCATGTAAATCACATACTTCATCGAGATGTCAAGTGTTCAAATATTTTCTTGACAAAAGATCGAGACATCCGTCTAGGTGACTTTGGCCTTGCTAAAATGTTGACATCTGATGATCTTGCTTCCTCAGTTGTTGGGACCCCAACTTATATGTGTCCTGAGCTTCTTGCTGACATACCCTATGGTTCTAAGTCAGACATCTGGTCTTTGGGATGCTGTGTTTATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCTTTTGATATACAAGCATTGATTAACAAAATAAACAAGTCTATAGTGGCTCCACTTCCAACTATATACTCTAGTGCTTTCCGAGGGCTTGTGAAAAGCATGCTACGGAAAAATCCAGAGCTTAGGCCAACGGCTGGTGAGTTATTGAATCATCCACATCTTCAGCCTTACATTCAAAAAATTCAGCTACAACTAAGTAGCCCCAGAAGTAGTAGTACTTTGGCATTTCAATGGCATGAGAAAAACCATGCAAGAAGTAGGTTCATAGAGCCAGAATCTGTTTCTTCTCTTTCTGGCCAAGACAAATGCTTGTCATTAAGCAGTGACAACAACAGGTCCTTGAATCCAAGTGTTTCTGGAACTGATGAACAAGGATCTCAGTGTTCTTCTACCCAAAGAGCAATTGGATCATCATCCACTTATTCAAAAGAGAAGCTCTATGAACTATCTATTGCCTGTGTCCCTGACAAATGCAATACTTATAAATCATCAAAAGCTAGAAAGTCCTCAATTGTTCAGAGACCTTCAACACTGAGAACTGCTAAGGCTTCTGCCACACTCAGAGGCCAGAAAATGACTCCATCTAGGACACACCCAATGCCTAATGCAGCAATCCGCAGAGCATCAATTCCACCACCAAGTAGAGCAAACATTGGCCTTCTCCAATGTGTGGAGTCTCCCAATGTCTCGGTTAACACTCCGAGAATCGACAAGATTGCAGAGTTCCCTCTGGCCTCATATGAGGATAATTTCTTCCCTGGCAAAGTAACATGCCCATCACCATCACCATCACCATCACCATCACCAACATCAATAATAACCACGAGCGAGGAAAAGTGCATGATCCAGGTTGTGGACAAAGCCACTGTCCACAACACCAACAGTGAACACACTGCTGATCATAAGCATCGATTCGACACCTCGTCGTTGCAGCAACGTGCAGAGGCATTGGAGGGGCTGCTAGAGTTCAGTGCAAGGCTGCTACAACAACACAGGTTTGATGAACTTGGAGTCTTGTTGAAGCCATTTGGGCCTGAGAAGGTTTCTCCAAGAGAAACAGCTATTTGGTTGGCCAAGAGCTTCAAACATACTCTTCTTTAA 1713 0.4279 MEQYEILEQIGKGAFGSALLVKHKHEKKKYVLKKIRLARQTDRARRSAHQEMELISKVQNPFIVEHKDSWVERGCFVCIVLSYCEGGDMAEAIKKANGVHFPEEKLCKWLVQLLMALDYLHVNHILHRDVKCSNIFLTKDRDIRLGDFGLAKMLTSDDLASSVVGTPTYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKAFDIQALINKINKSIVAPLPTIYSSAFRGLVKSMLRKNPELRPTAGELLNHPHLQPYIQKIQLQLSSPRSSSTLAFQWHEKNHARSRFIEPESVSSLSGQDKCLSLSSDNNRSLNPSVSGTDEQGSQCSSTQRAIGSSSTYSKEKLYELSIACVPDKCNTYKSSKARKSSIVQRPSTLRTAKASATLRGQKMTPSRTHPMPNAAIRRASIPPPSRANIGLLQCVESPNVSVNTPRIDKIAEFPLASYEDNFFPGKVTCPSPSPSPSPSPTSIITTSEEKCMIQVVDKATVHNTNSEHTADHKHRFDTSSLQQRAEALEGLLEFSARLLQQHRFDELGVLLKPFGPEKVSPRETAIWLAKSFKHTLL* 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1137 570 MobiDBLite consensus disorder prediction 373 401 - -
Ahy6g1137 570 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Ahy6g1137 570 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 1 494 - -
Ahy6g1137 570 CDD STKc_Nek 3 258 - -
Ahy6g1137 570 Pfam Protein kinase domain 4 257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1137 570 MobiDBLite consensus disorder prediction 304 339 - -
Ahy6g1137 570 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Ahy6g1137 570 MobiDBLite consensus disorder prediction 373 404 - -
Ahy6g1137 570 SUPERFAMILY Protein kinase-like (PK-like) 1 309 IPR011009 -
Ahy6g1137 570 ProSiteProfiles Protein kinase domain profile. 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1137 570 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 473 559 - -
Ahy6g1137 570 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Ahy6g1137 570 Gene3D Transferase(Phosphotransferase) domain 1 86 325 - -
Ahy6g1137 570 SMART serkin_6 4 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g1137 570 PANTHER SERINE/THREONINE-KINASE NEK4 473 559 - -
Ahy6g1137 570 PANTHER SERINE/THREONINE-KINASE NEK4 1 494 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1137 Ahy-Chr6 16628005 16632236 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1137 10 259 MAP Kinase Kinase Kinase AT1G53570 31.765 1.95e-36 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Ahy6g1137 Pkinase 1.20E-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1137 K08857 - gmx:100810347 758.829
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0187 16 1970324 1974339 Ahy6g1137 6 16628005 16632236 hybridization
Ahy6g1137 6 16628005 16632236 Ahy12g0775 12 13688806 13694840 PCT
Ahy6g1137 6 16628005 16632236 Ahy9g1392 9 61485882 61493352 PCT
Ahy12g0775 12 13688806 13694840 Ahy6g1137 6 16628005 16632236 PCT
Ahy9g1392 9 61485882 61493352 Ahy6g1137 6 16628005 16632236 PCT