Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1095 ATGCCAAGCTGTAGCAGGGTTCAAAGCATGCTGCAGGCTGCGGTTCAATCACTTCACTGGACTTACACCATCTTTTGGCAACTCTCTCCACAACAAAGAGTTCTAAGGTGGAGTGATGGATTCTACAATGGAGAAATTAAGGTTAGGAGGACAGTAGAAGCAATAGAAGCTAACAAGAGTAATAGTAATAATGAGGAGGCGTCTCTCCAGAGAAGCAACCAGCTTAGAGACCTCTATGACTTACTATTGTCTGATCGCCAGGGAGACCTCATCTTTGCTGCTGATCCCCCGGCAACTCCGCGTCCTTGTACCGCCTTGTCGCCGGAGGATCTTAGCGAATCCGAATGGTACTATTTGATGTGTGTCTCCTTCTCCTTTGCTCCTGGTGTAGGGTTGCCGGGGAAGGCATATGCGAGGAGGCAGCATGTTTGGCTCCAAGGTGCAAACGAAGCGGACACCAAGACATTTTCAAGAGCAATTCTTGCCAAGAGTGCTGATGTGAAGACAGTGGTGTGCATTCCAATGTTGGATGGCGTCGTTGAACTCGGCACAACTGATAAGGTAAAAGAAGATATCAACTTAATCAAACATATAAAGAGCTTCTTCATAGGAGATCACCACCGTCCCCAACCAAAGCATGCCCTATCTGAAAACTCTGCCTCCAATCCCATTACAGAAGAAGCTCAATTATTATTGGATTCAGAAATAGCAACCCTCCCACAAAGCAAGCTTAAGGAGCTGGTCATGGCAGAGGACAGTAGCCGAGCCGGATCGCCGGATGATGGCTCCAATCGGCTGAACTCAGCCGGGTTATTGGAGTTGCTTCCACCAGAATCAGCAGCTTCACTAGAACTACTACATGGTGATGAGTATGATAATAACTCAGAGGCTGAGACATCTCACCTATGTACGGAGCAAGAGGGCCACACACACTACTCTAAAACGGTGTCCACCATCCTAGAAGGCAGCTCTGGCCACCGGCCGGATGCTGTTTGCGGCTTATTGTCCTTCCAATCAGCTTTTGCCACGTGGAGCAGCAGTGTTTATAACTGCAACCAGGTGACAGTGGTTGAAAACCCCCAACGGCTCCTCAAGAACATATTGTTTAGGGTTCCATACTTGCATCGCAAGCAAAACCGCCACAATTCAGCACAAACCCTAGAACAATTGGAAAGAACGATAATGCCTTCTCCACAAGATGACCTAATCAGCAGCCACGTGGCAGCGGAGCGGCGGCGTCGCGAAAAGCTGAACGAGAAGTTCATCACGTTAAGGTCGTTGGTACCATATGTGACGAAAATGGACAAGGCTTCTATATTAGGAGACACAATTGAGTACGTGAAACAGTTGCACGAGAAGGTGAAGAAGCTGGAGGAGGAAGATAAACGGCGGAGAAGTGGAAAGAAGAGGAAGGAGAGGGCGGTGGAGGTTTCGGTGATAGAGGGTGAGATTTTGTTGGAGGTGGAGTGTATGAATAGGGAAGGGTTGTTGCTTGATTTGATGAGAGCGTTGAAGGATGTGGGAATAGAGGTGAGAGGGGTAAAATCGTCATTTAAGGGTGATGATGAAAGGGTGTTTGTGGTGGAGTTAAGAGGCAAGGTGAAAGAAAATGGAAAAAGGAATAATAATAATAAGAAGAAGAAGAAGATTAGCATCATGGAAGTGAAGAAGGTCCTTCGTAACATTATAAACCCTCATCATCCACTATAA 1710 0.4708 MPSCSRVQSMLQAAVQSLHWTYTIFWQLSPQQRVLRWSDGFYNGEIKVRRTVEAIEANKSNSNNEEASLQRSNQLRDLYDLLLSDRQGDLIFAADPPATPRPCTALSPEDLSESEWYYLMCVSFSFAPGVGLPGKAYARRQHVWLQGANEADTKTFSRAILAKSADVKTVVCIPMLDGVVELGTTDKVKEDINLIKHIKSFFIGDHHRPQPKHALSENSASNPITEEAQLLLDSEIATLPQSKLKELVMAEDSSRAGSPDDGSNRLNSAGLLELLPPESAASLELLHGDEYDNNSEAETSHLCTEQEGHTHYSKTVSTILEGSSGHRPDAVCGLLSFQSAFATWSSSVYNCNQVTVVENPQRLLKNILFRVPYLHRKQNRHNSAQTLEQLERTIMPSPQDDLISSHVAAERRRREKLNEKFITLRSLVPYVTKMDKASILGDTIEYVKQLHEKVKKLEEEDKRRRSGKKRKERAVEVSVIEGEILLEVECMNREGLLLDLMRALKDVGIEVRGVKSSFKGDDERVFVVELRGKVKENGKRNNNNKKKKKISIMEVKKVLRNIINPHHPL* 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1095 569 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 202 IPR025610 -
Ahy6g1095 569 SMART finulus 407 456 IPR011598 GO:0046983
Ahy6g1095 569 Coils Coil 440 460 - -
Ahy6g1095 569 Coils Coil 52 72 - -
Ahy6g1095 569 Gene3D - 403 474 IPR036638 GO:0046983
Ahy6g1095 569 ProSiteProfiles ACT domain profile. 485 563 IPR002912 -
Ahy6g1095 569 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 401 450 IPR011598 GO:0046983
Ahy6g1095 569 PANTHER TRANSCRIPTION FACTOR TT8 6 563 - -
Ahy6g1095 569 Pfam Helix-loop-helix DNA-binding domain 405 451 IPR011598 GO:0046983
Ahy6g1095 569 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 400 462 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1095 Ahy-Chr6 15802990 15815888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1095 7 563 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09820 44.930 1.29e-146 431
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy6g1095 bHLH-MYC_N 3.80E-50 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1095 - - aprc:113862120 465.307