Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1089 ATGAGCTACCACGCGAATAGTGAAGAGGGCCGAAGAGGTTGGAAAAGGAAGCCCCCGGGAATGGAACGTTGGGGGAGAGAACAGAGGCCGTACGATACAAACTCTAGACCTTACGATAGGAACATGGTTCCTCATGGTTGGTTAGGCTGCCCACCACATGGTCAAGAATTAGGATTCATAATACCATCAAAGGTCCCACTCGGTGAATCCTTCAACGATAACATCCTAGATTGGACAAAAGAAGGGATTAGTCATGTTAAGATAAGATGCAAGGGAAGAGATTCTGTGCCTGATGATGAATCTGTAAAAAAATTTTGTGACGAGGTTCTGGACTTTTGCTCCCGAAGAACAAATACAATGAAATATATACTAGTACATTGCACACATGGGCATAACCGTACAGGTTATATGATTGTTCATTTTCTTGTGCGCACAGAATCCATTTCTGTGACTGAGGCAATAAATAGATTTGCTCAGGCTCGTTACCCAGGAATTTACAAGCAGGATTACATTGACGCCCTATATATGTTTTATCGTGAAAAGAAGCCTGAAGATCTTGTTTGTCCTCAGACTCCAGAATGGAAAAGACTTTGTGAGACAGATTTTGATGGTGCTGCTGTCCCAGCTGTAGACAACTATAGAGATGTGCCTCAGCAGGATGCTGTAGAAAATTATGGAAATGTTCCTCAGCAGGTGCATGCTGTAGAAAATCATGGAAATGTTCCTCAGCAGGAGAATACCATGAGGAATGAAGCATTGACTAATGACGATATTTTGGGAGATCCCATTCCTTCATATCAGCTGCATACAATGCAAGAAGTTTGTTATCAACTGCTCAAACTGGGCACAGGGGGGAGAGGACGTCCGCAGTTTCCTGGATCACACCCCGTTTCTTTGAACAGTGAAAATCTACAACTCTTAAGACAGCGGTATTACTATGCCACTTGGAAAGCTGATGGAACTCGTTACATGATGCTGATTACTTTTGATGGATGTTATCTGATCGACAGAAAGTTTCTCTTCCGAAAGATCAACATGCGGTTTCCTTGCAGATACTCAAATGGGGGTACACCTGAGAAGAATCACCACTATACATTACTTGACGGGGAGATGATTATCGACATGGATCCGCATACGCATAAGCAAGAGAGAAGATACCTCATTTATGATCTGATGGCAATTAATCAAGTCTCAGTGACAGAGCTTCCATTCTACGAACGGTGGAAATTGCTGGATAAAGAAGTAATTGAGCCTCGTAACATGGAACGAGAGGCTCTTTCCAAGAGTACAAATCCTTATTACAGATATGACTTGGAGCCATTTAGCGTGAGGAGGAAGGGGTTTTGGTTACTTTCTACCGTTTCAAAGCTCCTTCATAAATTTATTCCACAACTCTCGCATCAATCAGATGGTCTGGTGTTCCAGGGTTGGGATGATCCATATGTCCCTCGCACACACGAAGGTCTTTTGAAGTGGAAATATCCCGAGATGAACTCCGTTGACTTCCTCTGTGAGGTTGGAGCAGGTGATCGCCCCCTCCTTTATCTGTTTGAACGCGGAAGGAAGAAGTTAATGGAAGGGAATAGAGTTATTTTTAAAGATGCATCAGATATTTCTTCCTATTCAGGGAAGATCATTGAGTGCTACTGGGACGCCACAGAGCGTCACTGGGTCTGTATGAGAATCAGATTTGACAAAGCAAATCCGAATGAGATTAATACCTACAGAAAGGTAATGCGAAGCATAAAGGATAACATTACCGAAGAGTTGCTGTTGAATGAGATCAATGGAATCATTAGCCTACCCTTATATGCAGACAGAATACAAAGGGATATCAAGGCTCACCAGAACACCGTCTTGTTGCGGCGCAGATAA 1875 0.4299 MSYHANSEEGRRGWKRKPPGMERWGREQRPYDTNSRPYDRNMVPHGWLGCPPHGQELGFIIPSKVPLGESFNDNILDWTKEGISHVKIRCKGRDSVPDDESVKKFCDEVLDFCSRRTNTMKYILVHCTHGHNRTGYMIVHFLVRTESISVTEAINRFAQARYPGIYKQDYIDALYMFYREKKPEDLVCPQTPEWKRLCETDFDGAAVPAVDNYRDVPQQDAVENYGNVPQQVHAVENHGNVPQQENTMRNEALTNDDILGDPIPSYQLHTMQEVCYQLLKLGTGGRGRPQFPGSHPVSLNSENLQLLRQRYYYATWKADGTRYMMLITFDGCYLIDRKFLFRKINMRFPCRYSNGGTPEKNHHYTLLDGEMIIDMDPHTHKQERRYLIYDLMAINQVSVTELPFYERWKLLDKEVIEPRNMEREALSKSTNPYYRYDLEPFSVRRKGFWLLSTVSKLLHKFIPQLSHQSDGLVFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLCEVGAGDRPLLYLFERGRKKLMEGNRVIFKDASDISSYSGKIIECYWDATERHWVCMRIRFDKANPNEINTYRKVMRSIKDNITEELLLNEINGIISLPLYADRIQRDIKAHQNTVLLRRR* 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1089 624 SUPERFAMILY Nucleic acid-binding proteins 496 608 IPR012340 -
Ahy6g1089 624 PANTHER MRNA-CAPPING ENZYME-LIKE 4 75 - -
Ahy6g1089 624 PANTHER MRNA-CAPPING ENZYME-LIKE 77 624 - -
Ahy6g1089 624 PANTHER MRNA-CAPPING ENZYME 4 75 - -
Ahy6g1089 624 PANTHER MRNA-CAPPING ENZYME 77 624 - -
Ahy6g1089 624 CDD Adenylation_mRNA_capping 267 494 IPR001339 GO:0004484|GO:0005524|GO:0006370
Ahy6g1089 624 SMART dsp_5 40 180 IPR020422 GO:0006470|GO:0008138
Ahy6g1089 624 Pfam Dual specificity phosphatase, catalytic domain 87 179 IPR000340 GO:0008138|GO:0016311
Ahy6g1089 624 MobiDBLite consensus disorder prediction 1 36 - -
Ahy6g1089 624 PIRSF mRNA_capping_HCE 30 80 IPR017074 GO:0004484|GO:0006370|GO:0140818
Ahy6g1089 624 PIRSF mRNA_capping_HCE 76 624 IPR017074 GO:0004484|GO:0006370|GO:0140818
Ahy6g1089 624 Pfam mRNA capping enzyme, C-terminal domain 524 591 IPR013846 -
Ahy6g1089 624 ProSitePatterns Tyrosine specific protein phosphatases active site. 125 135 IPR016130 GO:0016311|GO:0016791
Ahy6g1089 624 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 261 494 - -
Ahy6g1089 624 MobiDBLite consensus disorder prediction 8 34 - -
Ahy6g1089 624 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 103 161 IPR000387 GO:0016311|GO:0016791
Ahy6g1089 624 Pfam mRNA capping enzyme, catalytic domain 295 493 IPR001339 GO:0004484|GO:0005524|GO:0006370
Ahy6g1089 624 Gene3D - 492 600 IPR012340 -
Ahy6g1089 624 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 43 195 IPR029021 -
Ahy6g1089 624 Gene3D DNA ligase/mRNA capping enzyme 254 491 - -
Ahy6g1089 624 Gene3D Protein tyrosine phosphatase superfamily 20 201 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1089 Ahy-Chr6 15706733 15713606 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1089 26 614 Protein tyrosine phosphatase (PTP) family AT3G09100 56.869 0.0 714
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1089 K13917 - gmx:100778292 1043.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0232 16 2534938 2541778 Ahy6g1089 6 15706733 15713606 hybridization