Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1083 ATGCCTAGATTGTACTATGACACATTTCATCCCACAATCCACTTTCAGATATCATCATCATCATTATCACTCCCTAAACCAATGATCTCCCGCTGCAGCATAGTCCAATCTCACCACCCCAATTTCACAATCTCATACCTGATTGACTCATGTAGTCTCTCTCCAGACACTGCTGCTCTTACTTCCCAAAAGCTTCACCTTCCTTCTGCTGAAAGACCAGACTCAGTTCTCACCCTTCTCAGGGAGCATGGTTTCACAGATACCCAGATTTCAAACCTCATCAGAAAACGCCTATTGTTTCTCTTAGCAAACCCAGATATCCTCTTGCCAAAGTTTCAATTTTTCCTCTCCATTGGGATTTTCAATACCAACCTCGCAAGAACCCTAACTGCTTATCCAACCCTTTTGAGCCGGAGCTTGGAGAAACAGATCATACCCTGTTACAATTTTCTCAAGAGTGTGTTGATTTCTGATGAAAAGGTTGCATCTTCATTGAAGCGCACATCTTGGGTCTTCCTTGAGGATCACAAGAAGAACCTCGTACCAAACCTCAATCTCCTAAAAGAGATGGATGTTCCTAAATCATGTGTTACGCTGTTGCTGACTCATTTTTCGGAGGCATTGATGCAGAAAAAGAAAAACTTTGCAAAGCTTTCTAAGGAGATTAAAGAAATGGGGTTTAATCCAAAAAATACAATTTTTGTGTTGGCCATTCATGTGCTCTCAGGTGAGGGTAACAAATCCATATATAACCGCTGTTACGAGGTTTATAAGAGGTGGGGTTGGTCCACTTTGGGAGGTGGAAGGAAAGGTGGTCAGGGGTGGAATTGGAGGGAAGGAGGGGATGCGGTGGAGGTGGGAGGAATGAAGGTGAGAGAGAGAAGCAGGAGCAGAGGAGGGAGACGGAAAGGTGGAAGAAGAAGAAATGTTTTGTTACGATTCAAAGGGTTCTCTATTTCTCGAGGCGAGGTAGAGCGGATGGATGAACAAACGATGAACTTTAAGGATCGTGTGGGGCGATGCCGGGGAGAGAAGGGAATGCGTCGAGGCGGCAAACAGCAACAACACAACTACATTTTTTCCTTGCCGGAACTTCTAGCCATCCTGCGCTCTCTCTCACCTTCCAAACTTCAGCCCCTTCGAATTGGCCACGGGGACTCGACTCGCATTAAGAGAAGAGAGCGCAACCTGCCCCCGCCGCGCAACCTGCTGCCGCCGCGCAAGACGTTGCCGCCGCCGTGCAAGACGCTTCCGCCTCCGTCGCGCAAGACGCTGCTTCAACGCTTGGAGATTCCTGCATTAAAATCTGCCGCAACCTGCGCCCGCCACCGCCCAACCTGCCGCCGATGCGCAGGACGCTGCCGCCGCGGTGCCAAGACGCTTCACCCGCCGCCGCGCAAGACGCTTCACCCGCCGCCGCGCAAGACGCTGCCTCAACTCTTGGAGGAGCGATCAATTGGACGATCTCGTGGATTTGGATATGTTACATTTGCTTCAATGGATGATGCTAAGGATGTTCTATCAGGTGAACATGTTCTTGGCAACAGGATGCTGGAAGTCAAAGTGGCCACACCAAAGTGGGGTTATGGAATTCCCAGTGGGAGGCCATCAAGAGCAGATTGGAGAGACTTGGGAATGGGACACGATGAAATGAGGGGATTACTCCCTATTGCTTTTGAATATTCAGCGAGAATGCTGTTCACAAAGGCATCTTCCAGTGCTCATATGTTGCATGCCATGAACTGTGCGCCAAAGTAG 1758 0.4909 MPRLYYDTFHPTIHFQISSSSLSLPKPMISRCSIVQSHHPNFTISYLIDSCSLSPDTAALTSQKLHLPSAERPDSVLTLLREHGFTDTQISNLIRKRLLFLLANPDILLPKFQFFLSIGIFNTNLARTLTAYPTLLSRSLEKQIIPCYNFLKSVLISDEKVASSLKRTSWVFLEDHKKNLVPNLNLLKEMDVPKSCVTLLLTHFSEALMQKKKNFAKLSKEIKEMGFNPKNTIFVLAIHVLSGEGNKSIYNRCYEVYKRWGWSTLGGGRKGGQGWNWREGGDAVEVGGMKVRERSRSRGGRRKGGRRRNVLLRFKGFSISRGEVERMDEQTMNFKDRVGRCRGEKGMRRGGKQQQHNYIFSLPELLAILRSLSPSKLQPLRIGHGDSTRIKRRERNLPPPRNLLPPRKTLPPPCKTLPPPSRKTLLQRLEIPALKSAATCARHRPTCRRCAGRCRRGAKTLHPPPRKTLHPPPRKTLPQLLEERSIGRSRGFGYVTFASMDDAKDVLSGEHVLGNRMLEVKVATPKWGYGIPSGRPSRADWRDLGMGHDEMRGLLPIAFEYSARMLFTKASSSAHMLHAMNCAPK* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1083 585 SMART mt_12 162 193 IPR003690 GO:0003690|GO:0006355
Ahy6g1083 585 SMART mt_12 91 121 IPR003690 GO:0003690|GO:0006355
Ahy6g1083 585 SMART mt_12 126 157 IPR003690 GO:0003690|GO:0006355
Ahy6g1083 585 Gene3D - 470 528 IPR012677 -
Ahy6g1083 585 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 479 525 IPR000504 GO:0003723
Ahy6g1083 585 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 18 263 - -
Ahy6g1083 585 MobiDBLite consensus disorder prediction 399 419 - -
Ahy6g1083 585 MobiDBLite consensus disorder prediction 379 421 - -
Ahy6g1083 585 Pfam mTERF 77 228 IPR003690 GO:0003690|GO:0006355
Ahy6g1083 585 SUPERFAMILY RNA-binding domain, RBD 485 541 IPR035979 GO:0003676
Ahy6g1083 585 Gene3D Transcription termination factor 3, mitochondrial 52 155 IPR038538 -
Ahy6g1083 585 PANTHER CGI-12 PROTEIN-RELATED 18 263 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1083 Ahy-Chr6 15596779 15601598 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Ahy6g1083 mTERF 1.20E-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1083 K15032 - ahf:112805356 1073.92