Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1007 ATGGAGCTTGCTTTGAGCTTAGGGGAAGCACCGAAGTCCTTCACTTTGCTTGACAACACTCCCAAACTACCTAATAACAAGGATCCAGTGGGTTTCTGCATAGCACTTGGTGCTGCTGCTTCCTCCGCCGGAAAATCCTCTGAGGAAGAGAGAAGAGGATCCTCAGATCCGCCAGTTCAGCTCGACCTTCTCCCTTCAACGCCGGTTCTTCGCTCCCAACACCCATCTTCACACCTTCGAATTCCATGGCTCAACGATGCACTTGGTTTGGAGAGGGTGACATCGGAGGCACCGGCGGCGAGGGCGTTGGACGTGAACTCTTTCCCGGTGGCTCCTGCGGCGGGAGAAGACGGGGACGACGGCGCTGCACTGTCTTCGCCTAACAGCGCCGTATCGTCCTTTCAGATGGATTTCTGTCTGAGAAACGGGAACGGTGGTAACGGCGGTGATGGTGCGGCGGCGATGATGAGGAACAGGAGAGACGTGGAAGGTGGTGAGGGCAACGACAGAGGCACCAGCGATGACGACGAGAACGGATCCACCAGGAAGAAGCTCAGGCTCTCTAAGGAACAATCTGCGTTTCTTGAAGAGAGCTTCAAAGAACACACCACCCTTAATCCTAAGCAGAAACTGGCTCTTGCGAAACAGTTAAACCTTCGTCCCCGTCAAGTTGAAGTTTGGTTTCAGAACAGAAGAGCAAGGACCAAGTTGAAGCAAACGGAGGTGGATTGCGAGTACTTGAAGAGGTGCTGTGACACCTTAACTGAAGAGAATCGGAGGTTGCAGAAGGAGCTTCAAGAGCTGAGGGCATTAAAGACTTCTCAACCCTTCTACATGCAGCTTCCGGCCACCACTCTCACAATGTGCCCTTCATGTGAAAGGGTCGCCACCAACACCGCCGCTAATAACAATGACGCTTCTCAGATTGCTTCCGCTTTGTCTCTTAGTAACAAGCCCAGAATCTTGCCATTTCCTAATACTCAGGCCCATCCTCCTCCGGCCCAAAAGGCCCATCAATGA 1020 0.5294 MELALSLGEAPKSFTLLDNTPKLPNNKDPVGFCIALGAAASSAGKSSEEERRGSSDPPVQLDLLPSTPVLRSQHPSSHLRIPWLNDALGLERVTSEAPAARALDVNSFPVAPAAGEDGDDGAALSSPNSAVSSFQMDFCLRNGNGGNGGDGAAAMMRNRRDVEGGEGNDRGTSDDDENGSTRKKLRLSKEQSAFLEESFKEHTTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCDTLTEENRRLQKELQELRALKTSQPFYMQLPATTLTMCPSCERVATNTAANNNDASQIASALSLSNKPRILPFPNTQAHPPPAQKAHQ* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1007 339 CDD homeodomain 182 239 IPR001356 GO:0003677
Ahy6g1007 339 ProSiteProfiles 'Homeobox' domain profile. 178 238 IPR001356 GO:0003677
Ahy6g1007 339 Gene3D - 186 236 - -
Ahy6g1007 339 PANTHER HOMEOBOX ASSOCIATED LEUCINE ZIPPER PROTEIN 2 308 - -
Ahy6g1007 339 ProSitePatterns 'Homeobox' domain signature. 213 236 IPR017970 GO:0000981|GO:0006355
Ahy6g1007 339 SMART HOX_1 180 242 IPR001356 GO:0003677
Ahy6g1007 339 MobiDBLite consensus disorder prediction 43 76 - -
Ahy6g1007 339 SMART halz 238 281 IPR003106 GO:0006355|GO:0043565
Ahy6g1007 339 Coils Coil 244 274 - -
Ahy6g1007 339 MobiDBLite consensus disorder prediction 320 339 - -
Ahy6g1007 339 SUPERFAMILY Homeodomain-like 168 239 IPR009057 -
Ahy6g1007 339 Pfam Homeodomain 182 236 IPR001356 GO:0003677
Ahy6g1007 339 PANTHER - 2 308 - -
Ahy6g1007 339 Pfam Homeobox associated leucine zipper 238 272 IPR003106 GO:0006355|GO:0043565
Ahy6g1007 339 Pfam HD-ZIP protein N terminus 34 134 IPR006712 GO:0005634
Ahy6g1007 339 MobiDBLite consensus disorder prediction 161 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1007 Ahy-Chr6 13223963 13225791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1007 58 304 Homeobox Transcription Factor Family AT5G47370 53.333 6.94e-73 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Ahy6g1007 HD-ZIP_N 1.40E-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1007 K09338 - gmx:100776113 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0325 16 6774164 6776034 Ahy6g1007 6 13223963 13225791 hybridization