Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g1004 ATGAGGATCCGCAAAAGGCATGCGCTTTTATCTTCCTCCCACTTTCCGCCCACTCCTCCGTCAGATCCCCACCGCTCACCAGGGCTGGTGCAACTCACCACCGCAAATCTCCACCACCGACAACGTGGCTCCGATCATGGTGCTCAACCGTCTGATCAACCTGTCGCGCCTATCAACGGCTGGGATGATTCCTCCGGTGAGAGTGGGGCACACAGACAGCACATCAAGCAAGACCCTTCGGTGGAGGATGATTATGATTATGATGATGGAAGAAGAGAAGACAGTGGTGAAGACTCGGAGGACAAGAAAAGTAATCATTCCAGGAAAGGAAACATCTTTGGTTCTTCCCAAACACTGCCACCAGCACCACCGTTAAACCTTCAAGATGAGAGATGGTGTGAGGAAGAGAAAGCGATTCCTTTCAAGAAACGAAGAGGGAGCTTTGACAACATGGGAATAAGTGATGGTAAGAAGACGAAAGCGAGGATGAAGACGAAGATGAACAACAAGTGCAGTAATAGCAAGAGTGAAGAGGAGAAGGTGAAAGGGAAGAAGAAGAAGAAGGGGAGGGGCAGTGCAGTAATGGAAGGATCACGGTGCAGTCGTGTGAATGGAAGAGGTTGGAGGTGTTGCCAACAAACTCTTGTTGGTTACTCCCTCTGTGAGCATCACTTGGGCAAAGGAAGACTCAGAAGCATGACAAGTGTTCGAAACCGTTCTACAACAACAAAGGTGGTGGTGCAACAACAACAACAACAACAACAACAACATCCTCATGATCATGGTAATAATAATAATAATCCTTCATCTTCTTCTTCTTCTGATAAGCTCAGCGTGAAGACGATAATGGGTGGTAGTAGTAGCAACAAGAGGAAGATGAAGCAGCTTGGAATGGTGAAAGCTCGATCCATAAACAGCTTACTGGGCCAAACAACTAACACACCCATTGCGCACACTTAG 960 0.476 MRIRKRHALLSSSHFPPTPPSDPHRSPGLVQLTTANLHHRQRGSDHGAQPSDQPVAPINGWDDSSGESGAHRQHIKQDPSVEDDYDYDDGRREDSGEDSEDKKSNHSRKGNIFGSSQTLPPAPPLNLQDERWCEEEKAIPFKKRRGSFDNMGISDGKKTKARMKTKMNNKCSNSKSEEEKVKGKKKKKGRGSAVMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMTSVRNRSTTTKVVVQQQQQQQQQHPHDHGNNNNNPSSSSSSDKLSVKTIMGGSSSNKRKMKQLGMVKARSINSLLGQTTNTPIAHT* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g1004 319 PANTHER - 22 314 IPR031137 GO:0005634|GO:0006351|GO:0032502
Ahy6g1004 319 MobiDBLite consensus disorder prediction 109 123 - -
Ahy6g1004 319 ProSiteProfiles WRC domain profile. 194 238 IPR014977 -
Ahy6g1004 319 MobiDBLite consensus disorder prediction 146 162 - -
Ahy6g1004 319 MobiDBLite consensus disorder prediction 146 194 - -
Ahy6g1004 319 MobiDBLite consensus disorder prediction 67 81 - -
Ahy6g1004 319 PANTHER OS02G0773600 PROTEIN 22 314 - -
Ahy6g1004 319 Pfam WRC 196 236 IPR014977 -
Ahy6g1004 319 MobiDBLite consensus disorder prediction 1 129 - -
Ahy6g1004 319 MobiDBLite consensus disorder prediction 234 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g1004 Ahy-Chr6 13174412 13176523 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g1004 189 242 GRF Transcription Factor Family AT2G36400 37.037 6.74e-06 45.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g1004 - - aip:107645407 474.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0328 16 6821187 6823270 Ahy6g1004 6 13174412 13176523 hybridization
Ahy6g1004 6 13174412 13176523 Ahy19g0994 19 15860076 15862980 PCT
Ahy19g0994 19 15860076 15862980 Ahy6g1004 6 13174412 13176523 PCT