Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0986 ATGGCCAAAAAAGAAAGAGGAATGATTCAACAAAGCCAAGGAGGACTATTTGATACCATACAGTCTTGGAACATGGTTGGAGGAGGATCACGGCCGCCACTGCCGCCACAAATAGGCCCTGCTGCAACCATCATGAGCCGGTTCGAGTCGCCGGCTTCTGCCTTCTATGCAGCAGAACTCTGCATGGGGTTTGCAGAATATGAACACTCTCAGGCTCAGTTCTCTAAGATGAATAACGATAATAATGATTTGGAATTCCCTTTGTATCAAAGGGACAAATTTGATCTCTCAAACACTTTGCAAGCAATGGTGAATTCTCAATTCAATACCAAAAATCAATGCTTTAGATCATCCAACAAAATCCCATGTGACAATTTTCCTGCCAGAAAGTTCCACCACCAACAGAAGTTCTTCACTGATGCCATGGCTTCACCATTTCCTAACAAAGGAAATCAAGATAATATACAGGTGAGCTTCAATTCTTATCAAGATAGATCTTCATCACCTTCTTCAGGAGGAAGTGTATCAGCAAACTCTGCTTCTAATGGGGTAACCATATCGAGTAAGACGCGTATAAGATGGACTCAGGATCTTCATGAGAAGTTTGTTGAATGTGTGAATCGCCTTGGTGGTGCTGATAAGGCAACACCAAAGGCTGTATTGAAGATGATGGACTCAGATGGATTAACAATCTTTCATGTCAAAAGCCATTTGCAGAAATATAGAATTGCTAAGTACATGCCTGACCCAATTCATAATGGGAAATCTGACAAAAGAATCCACATAGAGAATCTTCAAGATCAACATCTTCATCTTGATATGAAGAGTGGAATTCAAATTAGAGAAGCACTTCAACAACAATTAGATGCACAAAAGCTTCTTCATGAACAACTAGAGAATCAGAGAAAGTTGCAGCTGCGAATCGAGGAACAAGGTAGGCAGTTGAAGAAAATGTTTGAAGAGCAACAAAAAGCAACGAATGAACTTTTGAGTTGTCAGAATATAATAACCAAAGATGATACATAA 1026 0.3996 MAKKERGMIQQSQGGLFDTIQSWNMVGGGSRPPLPPQIGPAATIMSRFESPASAFYAAELCMGFAEYEHSQAQFSKMNNDNNDLEFPLYQRDKFDLSNTLQAMVNSQFNTKNQCFRSSNKIPCDNFPARKFHHQQKFFTDAMASPFPNKGNQDNIQVSFNSYQDRSSSPSSGGSVSANSASNGVTISSKTRIRWTQDLHEKFVECVNRLGGADKATPKAVLKMMDSDGLTIFHVKSHLQKYRIAKYMPDPIHNGKSDKRIHIENLQDQHLHLDMKSGIQIREALQQQLDAQKLLHEQLENQRKLQLRIEEQGRQLKKMFEEQQKATNELLSCQNIITKDDT* 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0986 341 SUPERFAMILY Homeodomain-like 187 243 IPR009057 -
Ahy6g0986 341 Coils Coil 281 301 - -
Ahy6g0986 341 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 189 244 IPR006447 GO:0003677
Ahy6g0986 341 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 186 246 IPR017930 -
Ahy6g0986 341 MobiDBLite consensus disorder prediction 161 182 - -
Ahy6g0986 341 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 41 339 - -
Ahy6g0986 341 Pfam Myb-like DNA-binding domain 193 242 IPR001005 -
Ahy6g0986 341 Coils Coil 308 328 - -
Ahy6g0986 341 Pfam MYB-CC type transfactor, LHEQLE motif 278 325 IPR025756 -
Ahy6g0986 341 Gene3D - 188 247 - -
Ahy6g0986 341 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 41 339 IPR044848 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0986 Ahy-Chr6 12946946 12949643 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0986 174 322 G2-like Transcription Factor Family AT4G28610 54.000 6.61e-48 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Ahy6g0986 Myb_DNA-binding 6.30E-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0986 - - gmx:100527257 342.043
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0345 16 6958677 6961146 Ahy6g0986 6 12946946 12949643 hybridization