Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0981 ATGGCTTCGGGGGGAAGAACTGCCACCAATAACCATAAGAACCAACCACCTTCCTCCACAGTTGAGTCTCTAAATGGCTTGAAATTCGGCCAAAAAATATATTTTGAGGATTTGGGTCTCTCCACACCGTCAACCACTTATTCAACTTCATCCTCTTCTTCTGCTGTTGGTGTTCCCAAGAAGGGTAGGGGCGGTTCGGTTCAGCATGCTCAGCAGCCACCGAGGTGCCAGGTTGAGGGTTGCAAAGCAGATCTGAGTGATGCTAAGGCTTACTATTCAAGGCACAAAGTTTGTGCCATGCACTCCAAATCCCCCACTGTCACTGTTTCTGGTCTCCAACAAAGGTTTTGCCAACAGTGTAGCAGATTTCATCAGCTTCCTGAATTTGATCAAGGGAAACGAAGTTGCCGCAGGCGGCTTGCCGGCCATAACGAACGTCGGAGAAAGCCCCCACCATCCAGCAACTTCTTAACCTCTCGTTATGCAAGACTTTCTTCGTCACTTTTCGATGATAGTGGCAAAGGTGGAAGCTTCCTGATGGAATTCGCTTCATACCCGAAGCTCGGTCTTAGGAACACAGTTCCAAATCCCAGATCATCTCAACCAAGCTGGCAGGGCTATTCAGAGACATCATCTGACCTTTTCTTGCAAGGTTCAGTGGGTGGGACAAGCATCCCCAATCTCAGACACCCTCTTCCTTCGAGCGAAAGTTATGCCGGCGTAGCAGACTCAAGCTGTGCTCTCTCTCTTCTGTCAAGCCAAACATGGGGATCTAGTAACATGGCACCAAGTCTCGGGTTGAATAACATGTTGAATTTCAGTGGTGCACCTGTGACACAACTTGCTGCATCATCCCATGGTGAATCCATTCATCAAGTTCCGAATCCCTGGTGGTGTTCAAACAAGGTTGTCCCTGATCTAGGCCTCGGTCAATTCTCGCAGCTTCCTAATAGCCAAGTTCCCGGCGAGTTCGATGCACTGGAACCAGGTAGGAGGCATCATGTGAATCTAGAGTAG 1017 0.4907 MASGGRTATNNHKNQPPSSTVESLNGLKFGQKIYFEDLGLSTPSTTYSTSSSSSAVGVPKKGRGGSVQHAQQPPRCQVEGCKADLSDAKAYYSRHKVCAMHSKSPTVTVSGLQQRFCQQCSRFHQLPEFDQGKRSCRRRLAGHNERRRKPPPSSNFLTSRYARLSSSLFDDSGKGGSFLMEFASYPKLGLRNTVPNPRSSQPSWQGYSETSSDLFLQGSVGGTSIPNLRHPLPSSESYAGVADSSCALSLLSSQTWGSSNMAPSLGLNNMLNFSGAPVTQLAASSHGESIHQVPNPWWCSNKVVPDLGLGQFSQLPNSQVPGEFDALEPGRRHHVNLE* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0981 338 MobiDBLite consensus disorder prediction 43 78 - -
Ahy6g0981 338 MobiDBLite consensus disorder prediction 43 57 - -
Ahy6g0981 338 ProSiteProfiles Zinc finger SBP-type profile. 73 150 IPR004333 GO:0003677
Ahy6g0981 338 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 17 1 338 - -
Ahy6g0981 338 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 1 338 IPR044817 GO:0003677
Ahy6g0981 338 Pfam SBP domain 76 149 IPR004333 GO:0003677
Ahy6g0981 338 SUPERFAMILY SBT domain 74 154 IPR036893 GO:0003677|GO:0005634
Ahy6g0981 338 MobiDBLite consensus disorder prediction 1 23 - -
Ahy6g0981 338 Gene3D - 66 137 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0981 Ahy-Chr6 12904448 12907238 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0981 27 325 SBP-box Gene Family AT2G42200 44.012 4.13e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Ahy6g0981 SBP 8.70E-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0981 - - ahf:112696101 665.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0350 16 7021350 7024195 Ahy6g0981 6 12904448 12907238 hybridization