Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0980 ATGATTTGCGACTACCTCTACGTGCAACTCAACCTCGTTGTCTTCTCGTCGATTTTGATTTCTCAGGGTTTGGCATCTACTCCTTCACCCGAAGTATCAGCTCTGCAGGATCTATACAAGGCTTTAAACTACCCTCCTCAGCTCCAAGGTTGGAATGGTAGTGATCCATGCGAGGAGTCTTGGAAAGGAATCGCTTGTTCCGGGTCATCAGTTATACACATAAAAATTCGCGGACTGAACCTCACTGGAAATTTTGGAAGCATGCTCCGTGATCTTCAGAACTTGAAGGAACTTGATGTCAGTTCTAATAACATAGGTGGAGAAATACCATTTAGCTTACCCCGCAATGCAAGAAATATGAATTTAAGCCACAATCTCTTAAATGGACCCATTGGCGATGTATTTACTGGCCTGGATGATCTCAAAGAAATGGACCTTTCATACAACAATTTCTCAGGAGATCTTCCAAGATCGTTTGGTTCCTTGAAAAACCTTGATAAATTGTTTCTGCAGAATAACAGATTTACTGGATCAGTCACCTACCTGGCTGAACTTCCACTTTCATATCTGAACATCCAAGACAATCTGTTTAGTGGCATTCTTCCACTCCACTTTCACACCATACCGAATTTACGGATTGGAGGGAATAACTTCCATTCAGAGGACAGCTCTCCTCCCTGGTCTTTTCCTCTGGACACTGTACCAATAGCAGTTGAACGTAACTTTAGTCACCCACCCTCACACCCAGTTGAACATAACTTTAGTCACCCACCCATACACCCAGTTGAGCATAATACAACTGTGGCAAGTGCCATAAGGAACTATGCTCCTCCACCTCCCAAGGTTAGTCAGCACAAGGAAAAACATATGGGTCCCGGAGGAATAGCTTTTATGGTTGGTGCAGGAACACTAATGGCAACTGGTGTGGCACTCTTCGTTGCAATCCGTTTAAGTAAAAGGCGAGCACAGATGCCAAGCTCTAAGAGCTTGGAAAGCAACCATTTCTCTTTACATTCTCATCCAAGCAGTGCAACAATAGAGGTCTCGTCTACTGCTTTAGATGAGAGCCCACAAATCCCGGCTTTTGATCCTGCATCCCTCAGGGGTCCAATGGGATTGCCTCCTGTGCACCACAACAACATAGACGAAGCTTCAAGAAGAAGTTTTTCTAGAAGAAGCAGATCCACCGGAAGGACGAAAGTTTACACCGTATCGGAGCTTCAGTTTGCTACTAACAACTTCAATGAATGCAACATTCTGGGAGAGGGTTCTCTTGGCACTGTATACAGAGCCAAATTTCCTGATGGCAAAATTCTGGCAGTGAAGAGCATAAACTTGGCGGGTGTGTCTTACAGAGAAGAGGAAAAGTTCTTGGATGTTATCTGCACGGCTTCCCGATTGAAGCACCCCAACATAGTAGCACTGAATGGCTACTGTTTGGAGCGGGGAAAGCATCTTCTTGTGTATGATTATGTTAGGAATTTGACTCTGCATGATGCTCTTCACAAAGACGTATACAAGCCTCTATCATGGATCCTCCGTCTCCGGATAGCTGTCGGCGTTGCTAACGCCCTGGACTACTTGCACTCAGCATTCTCCCCACCTGTTGCCCATGGAAACTTGAAGGCTGCGAATGTTCTTCTGGACGAGAATTTGATGCCTCGTCTTTCTGACTGTGGCTTGGCTGCTTTGAGACCACTGAGGAGCATTCAGGCTACCGAGGCTCCTATTGATGTAGGTTACCTGTCACCTGACCATGGCAGAGCAGGAGGTAGCAGCAGAAAGAGAGATGTGTATGCCTTTGGGGTACTGCTTCTGGAAATGTTAACGGGAAGAAAAGCATTCGATGGTGGCAGGCCAATTGAGGAGCAGTACCTAGTGAAGTGGGCTTCACCCAGGCTTCACGATAACGCCAATTTGGAGCAGATGGTGGATCCCGGTATGAAGAGGACATTTTCATCCAAGGCTCTTTCTCGTTATGCTGCTATCGTCTCGCTCTGCATACAGCCTTCGAGGCATTTTCGTCCTCAGATGTCAGAAGTTGTGGACTCGCTTGTATCATTCTCGCAAAAGTTTAACATAGCAAAGGGCGGTGGTAGAGTAGGAGCAGATGGTGGCAACTTCATTGAACTTGAATCATTTGAGAAATCTTTCCGTTCAACAAACTCACGATTTATGGGTTCACCGGCGTTGAGCCATGTATCCGCCTAA 2211 0.46 MICDYLYVQLNLVVFSSILISQGLASTPSPEVSALQDLYKALNYPPQLQGWNGSDPCEESWKGIACSGSSVIHIKIRGLNLTGNFGSMLRDLQNLKELDVSSNNIGGEIPFSLPRNARNMNLSHNLLNGPIGDVFTGLDDLKEMDLSYNNFSGDLPRSFGSLKNLDKLFLQNNRFTGSVTYLAELPLSYLNIQDNLFSGILPLHFHTIPNLRIGGNNFHSEDSSPPWSFPLDTVPIAVERNFSHPPSHPVEHNFSHPPIHPVEHNTTVASAIRNYAPPPPKVSQHKEKHMGPGGIAFMVGAGTLMATGVALFVAIRLSKRRAQMPSSKSLESNHFSLHSHPSSATIEVSSTALDESPQIPAFDPASLRGPMGLPPVHHNNIDEASRRSFSRRSRSTGRTKVYTVSELQFATNNFNECNILGEGSLGTVYRAKFPDGKILAVKSINLAGVSYREEEKFLDVICTASRLKHPNIVALNGYCLERGKHLLVYDYVRNLTLHDALHKDVYKPLSWILRLRIAVGVANALDYLHSAFSPPVAHGNLKAANVLLDENLMPRLSDCGLAALRPLRSIQATEAPIDVGYLSPDHGRAGGSSRKRDVYAFGVLLLEMLTGRKAFDGGRPIEEQYLVKWASPRLHDNANLEQMVDPGMKRTFSSKALSRYAAIVSLCIQPSRHFRPQMSEVVDSLVSFSQKFNIAKGGGRVGADGGNFIELESFEKSFRSTNSRFMGSPALSHVSA* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0980 736 Gene3D Phosphorylase Kinase; domain 1 377 491 - -
Ahy6g0980 736 SUPERFAMILY Protein kinase-like (PK-like) 389 685 IPR011009 -
Ahy6g0980 736 SUPERFAMILY L domain-like 31 212 - -
Ahy6g0980 736 Gene3D Transferase(Phosphotransferase) domain 1 493 697 - -
Ahy6g0980 736 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
Ahy6g0980 736 PANTHER STRUBBELIG-RECEPTOR FAMILY PROTEIN 2 707 - -
Ahy6g0980 736 Pfam Leucine rich repeat 116 175 IPR001611 GO:0005515
Ahy6g0980 736 ProSiteProfiles Protein kinase domain profile. 414 688 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0980 736 PANTHER OS01G0253100 PROTEIN 2 707 IPR045271 GO:0004714|GO:0006468
Ahy6g0980 736 Gene3D Ribonuclease Inhibitor 28 236 IPR032675 -
Ahy6g0980 736 Pfam Protein tyrosine and serine/threonine kinase 418 685 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0980 Ahy-Chr6 12899422 12903863 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0980 10 736 Strubbelig Receptor Gene Family AT5G06820 48.688 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Ahy6g0980 PK_Tyr_Ser-Thr 2.10E-32 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0351 16 7031057 7035777 Ahy6g0980 6 12899422 12903863 hybridization
Ahy6g0980 6 12899422 12903863 Ahy12g1641 12 88948455 88954209 PCT
Ahy12g1641 12 88948455 88954209 Ahy6g0980 6 12899422 12903863 PCT