Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0978 ATGGCAGGGCCTTCTTTCTATGCCTCCTGTCTTTCCTCCTCCAGCAATTTGGGGACATCTTGGTTGGTATTAAAAACTCACAATGCAAGGGCCGTGCCAGGGAAACTACGCTGGAGGAGCAGTCTTACAATAAAAGCAGAAGTGAAGTTTGTTAATGCTGAACAAGCAAAGGAGCTTGTAACAGTTGATGGATATACTGTTCTAGATGTACGCGACAAAACACAGTTTGAGAGAGCTCACATAAAATCCTGCTATCATGTGCCTCTCTTTGTTGAAAATCAAGACAATGATCCTGGTACAATTGTAAAAAGGACTCTGCACAATAATTTCTCTGGGTTGTTCTTTGGTTTACCATTCACCAAGCCGAATCCTGATTTTGTACAATCGGTCAAGAGTCAGTTTTCGCCCGAAACTAAACTTCTGGTTGTATGTCAGGAAGGACTGAGGTCTGCTGCAGCTGCAAATAAACTAGAGCAGGCCGGTTTCTCAAATGTAGCATGCATAACGTCTGGCCTTCAAACTGTAAAACCAGGTACATTTGATTCTGTGGGATCCAAGGACTTGCAAGATGCCGGCAAAGCTGGTTTGGTGACAATCCAAGGGAAAATCTCAACTGTATTGGGAACAATTCTTGTTTGTGCATATTTGTTCATTACCTTCTTTCCTGACCAAGCAGAGAAGATATTCCAACTGGTCCCTGCAGGCTAA 708 0.4322 MAGPSFYASCLSSSSNLGTSWLVLKTHNARAVPGKLRWRSSLTIKAEVKFVNAEQAKELVTVDGYTVLDVRDKTQFERAHIKSCYHVPLFVENQDNDPGTIVKRTLHNNFSGLFFGLPFTKPNPDFVQSVKSQFSPETKLLVVCQEGLRSAAAANKLEQAGFSNVACITSGLQTVKPGTFDSVGSKDLQDAGKAGLVTIQGKISTVLGTILVCAYLFITFFPDQAEKIFQLVPAG* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0978 235 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 234 IPR044615 -
Ahy6g0978 235 Pfam Rhodanese-like domain 53 173 IPR001763 -
Ahy6g0978 235 ProSiteProfiles Rhodanese domain profile. 61 184 IPR001763 -
Ahy6g0978 235 SMART rhod_4 51 181 IPR001763 -
Ahy6g0978 235 Gene3D - 37 179 IPR036873 -
Ahy6g0978 235 CDD RHOD 55 176 - -
Ahy6g0978 235 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 45 173 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0978 Ahy-Chr6 12881514 12884353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0978 9 229 Sulfurtransferasese or Rhodanese AT2G42220 67.873 2.64e-114 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0978 - - ccaj:109797004 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0353 16 7047615 7050427 Ahy6g0978 6 12881514 12884353 hybridization