Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0972 ATGGGTTCGAGTGTTAAGAGCAGCAACCAAGGAAGCACTCAACTTGAACCACTTCAACAACAACATCATCATCATCATCGTCGTCATCATAATCAAATACAGCAAGAGCACCAAATCTCTTTCGGGATGATGCAATCTCCTTCATCATCATCCTCTATCATCCCGGGAAACTTGTTAAACAAGGATTCAGGTGGTGGTGGAGCTTATGATTTGGGTGAACTGGACCAAGCCCTTTTTCTCTACCTCGATGGACAAGCCGATCCCTCAAATACTCTTCATCAAGACCAAAGACAGAAGTCATCATCATCCGGAATGAGGCCTCATACGCTCAACATTTTCCCCTCTCAGCCTATGCACGTTCACCCATCATCATCCAATTCCAAGGCAAGTATGGAGTTAGTTTCTGCTTCCAAGAACGAACCCGCTTCTGCCACTGCTCCTCCTCCTCAACCACCTAAACCTGTCAAGCAGCGAGACAGTAACCGCAAGGGTCCGACCTCAAGTTCTGAACAAGAAGGACCCAAAACACCAGACCCCAAGACACTGAGACGACTTGCTCAGAATAGAGAGGCAGCTCGCAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAGCAGCTAGAATCCAGTAGGATTAGGCTTAATCAGATTGAGCAAGAGCTACAGCGTGCTAGATCTCAAGGCATATTCTTCGGTGGAAGTGGAGTTATGGGTGGAGAACAAGGTCTTGGTGTGGGTATTAATGGCATAAGCACAGAGGCTGCAATGTTTGACGTAGAATATGCTAGATGGCTAGAGGAGCACCACCGCCTAGTGTGCGAGCTGAGGGCGGCGGTGCAAGAACACCTACCTGAGAACGAGCTCAGACTCTTTGTGGACAATTGCTTGGCGCATTACGACCAAGTTATGAACCTCAAGGGTTTAGTGGCCAGATCCGATGTCTTCCACCTTGTTTCCGGCATGTGGAAGACGCCGGCTGAGCGTTGCTTTATGTGGATCGGTGGATTCAGGCCCTCAGAACTCATTAAGATTATGGTGAGTCAAATAGAGCCTCTGACGGAGCAACAAATACTTGGGATATGCGGGTTGCAACAATCAACACAAGAGGCAGAAGAGGCTCTTTCCCAAGGCCTTGAGGCTCTCAATCAATCTCTCCTGAACACTATCACATCAGATTCTTTGAGCTCTCCTCCTGTTATGGCTACCTACATGGGACAGATGGCTCTCGCCATGAACAAGCTCGCTACTCTTGAAGATTTCGTCAAACAGGAGGCTAGAAGAGTGAAGAGTGGAAGAGAAAGAGAAATTGAGTTTTGGCTTCAAATATGA 1326 0.4766 MGSSVKSSNQGSTQLEPLQQQHHHHHRRHHNQIQQEHQISFGMMQSPSSSSSIIPGNLLNKDSGGGGAYDLGELDQALFLYLDGQADPSNTLHQDQRQKSSSSGMRPHTLNIFPSQPMHVHPSSSNSKASMELVSASKNEPASATAPPPQPPKPVKQRDSNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRIRLNQIEQELQRARSQGIFFGGSGVMGGEQGLGVGINGISTEAAMFDVEYARWLEEHHRLVCELRAAVQEHLPENELRLFVDNCLAHYDQVMNLKGLVARSDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIMVSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLLNTITSDSLSSPPVMATYMGQMALAMNKLATLEDFVKQEARRVKSGREREIEFWLQI* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0972 441 MobiDBLite consensus disorder prediction 1 35 - -
Ahy6g0972 441 ProSiteProfiles DOG1 domain profile. 253 441 IPR025422 GO:0006351|GO:0043565
Ahy6g0972 441 SUPERFAMILY Leucine zipper domain 181 223 IPR046347 GO:0003700|GO:0006355
Ahy6g0972 441 MobiDBLite consensus disorder prediction 89 143 - -
Ahy6g0972 441 PANTHER TRANSCRIPTION FACTOR TGA9 80 422 - -
Ahy6g0972 441 PANTHER BZIP TRANSCRIPTION FACTOR TGA10 80 422 - -
Ahy6g0972 441 Pfam Seed dormancy control 271 345 IPR025422 GO:0006351|GO:0043565
Ahy6g0972 441 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 222 IPR004827 GO:0003700|GO:0006355
Ahy6g0972 441 MobiDBLite consensus disorder prediction 1 18 - -
Ahy6g0972 441 MobiDBLite consensus disorder prediction 89 183 - -
Ahy6g0972 441 SMART brlzneu 176 262 IPR004827 GO:0003700|GO:0006355
Ahy6g0972 441 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Ahy6g0972 441 Coils Coil 199 226 - -
Ahy6g0972 441 CDD bZIP_HBP1b-like 180 232 - -
Ahy6g0972 441 Pfam bZIP transcription factor 180 208 IPR004827 GO:0003700|GO:0006355
Ahy6g0972 441 Gene3D - 179 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0972 Ahy-Chr6 12796647 12802279 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0972 56 422 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 59.850 6.44e-155 445
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Ahy6g0972 DOG1 5.30E-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0972 K14431 - gmx:100799713 578.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0358 16 7110352 7116172 Ahy6g0972 6 12796647 12802279 hybridization
Ahy6g0972 6 12796647 12802279 Ahy12g1633 12 88826054 88838173 PCT
Ahy6g0972 6 12796647 12802279 Ahy2g1404 2 74466992 74478266 PCT
Ahy12g1633 12 88826054 88838173 Ahy6g0972 6 12796647 12802279 PCT
Ahy2g1404 2 74466992 74478266 Ahy6g0972 6 12796647 12802279 PCT