Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0959 ATGGATTCCAGTTCCCGTTATCACCAACAGCAGCTAAACTCATCGTCGTCATCAGCATCAGGATTGCTTCGATTTCGCTCTGCTCCTCCTTCAGTCCTCGAACAGTTACAGGTTGTTGAAGGTTCTTGTTCATCTGAACAGGAGAGGTCGTCGTCGTCGTCGTTCTTGAGATTCTTCAGTTCCAACAAAAATAAGCCTTCTTCAACAACAAAACCGCCATCACTTTCTTTGATGAATTCGAATCATCGCTTCACCAGACTGCACAACTCGTCAACTGCACCTTCCGCTTCCACTTCCTCTGGAACGGATCTACCAAGGCAGAGCACTTTTCCAGCTTCGCATTTCTCCTTCCACGATAATAACGGGTATGATACTAATGCAAATACTATGACGAAAGGTGTTGGAAACTACAGCGGCAGTGATGAACTTAGTCTATCCACAATGAACAGATTCAATAACCAAATTAGCTTCTCATCATCAAGAAGCCCTTCTTCTTCAGCAACAGCAACTAATAGTAACCGTAATGGTGGATTATTCTTCCCTAATTATGGTTCTTGGAATGAGACATCATACAAGAGGGACGACCGAAATAGGATTCATAAGTTAATTTTTGATGCTAATCAGAATGAAGAGTTTGGGAATAATAAAGTAGTTGATACACTATCGCATCAACTAAGTTTTCCAAAAGCGGAACCGGAGATGTTTGCAATGGAGAATATGATTCACTTCCCATTATCAGATTCTGTTCCATGTAAAATTAGAGCCAAAAGAGGATGTGCTACTCATCCCAGAAGCATTGCCGAAAGGGTGAGAAGGACTCGGATCAGTGAACGAATGAAAAAATTACAAGAGCTTGTTCCGAACATGGACAAGCAAGCCAGCACAGCAGACATGTTGGACATGGCTGTAGGATACATAAAAGATCTTCAGAAACAATTTAAGAATCTAAGTGACAGACGGGCTAAATGCAAGTGTATAAGGATGCAGAAATCAGATTCTTCAAAAAAATTTTGA 1014 0.4122 MDSSSRYHQQQLNSSSSSASGLLRFRSAPPSVLEQLQVVEGSCSSEQERSSSSSFLRFFSSNKNKPSSTTKPPSLSLMNSNHRFTRLHNSSTAPSASTSSGTDLPRQSTFPASHFSFHDNNGYDTNANTMTKGVGNYSGSDELSLSTMNRFNNQISFSSSRSPSSSATATNSNRNGGLFFPNYGSWNETSYKRDDRNRIHKLIFDANQNEEFGNNKVVDTLSHQLSFPKAEPEMFAMENMIHFPLSDSVPCKIRAKRGCATHPRSIAERVRRTRISERMKKLQELVPNMDKQASTADMLDMAVGYIKDLQKQFKNLSDRRAKCKCIRMQKSDSSKKF* 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0959 337 Gene3D - 260 332 IPR036638 GO:0046983
Ahy6g0959 337 MobiDBLite consensus disorder prediction 54 117 - -
Ahy6g0959 337 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 24 329 - -
Ahy6g0959 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 259 309 IPR011598 GO:0046983
Ahy6g0959 337 PANTHER TRANSCRIPTION FACTOR BHLH130 24 329 - -
Ahy6g0959 337 Pfam Helix-loop-helix DNA-binding domain 264 310 IPR011598 GO:0046983
Ahy6g0959 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 262 325 IPR036638 GO:0046983
Ahy6g0959 337 MobiDBLite consensus disorder prediction 1 23 - -
Ahy6g0959 337 SMART finulus 265 315 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0959 Ahy-Chr6 12661315 12665701 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0959 18 314 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G42280 40.115 6.98e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Ahy6g0959 HLH 3.70E-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0959 - - ahf:112758816 564.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0369 16 7224047 7228598 Ahy6g0959 6 12661315 12665701 hybridization
Ahy6g0959 6 12661315 12665701 Ahy12g1618 12 87721576 87724841 PCT
Ahy6g0959 6 12661315 12665701 Ahy2g1386 2 73674522 73677668 PCT
Ahy12g1618 12 87721576 87724841 Ahy6g0959 6 12661315 12665701 PCT
Ahy2g1386 2 73674522 73677668 Ahy6g0959 6 12661315 12665701 PCT