Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0956 ATGTCCATAAAGGAGGATGAGTTTAAGAATGATTCTGATAATAATTTGGGTGATGATTTCGATTATCAACCGAATGCAGAAGATGATGCTGATGACGACGATGTGGATTCTCTGGATTCCACTAGCAAGAGTGAAGAAGTTTGTGGTGTAAAAAGAATAGCGGATTTAATGGTGGAGGATATTTGGAACCTGGAGTTTAGGACGGAGGATGAGGCTTGCCAGTTTTATAACGCTTATTCTTGTTGGCATGGATTTGTAATGAGGAAGGACGACGTTGTTAGGGATAATCAAGATAGAATCATTAGCAGGCAACTTGTTTGCAACAAAGAGGGCTGGAGAAATATGAGGTATCTTGATATGGATGATAGATCAAGGGAGAAAGGTGGATATCATCATGCTGGCTTCACACGGAAAGATTTGTACAACCACATCGATCGCTATCGTCGGAAAAAAGTTAAAAACGGGGATGCCAATGCGGCAATAAACTATTTGATTGGCAAGTCAAACAACGATCCGCTGTTCTTTGGAAAGTATACGTTCACTAGTGACGAAAGGCTGGAGCATATTTTTTGGGCAGATGGGCAGTCAATTATCGACTATCACTGCTTTGGAGATATTGTTGCCTTTGATTCAACCTACAAGAAGAATAAATACAACAAGCCTTTGGTCATTTTCTCTGGATGCAATCATCACGGGCAGACTGTTATCTTTGGCTCCGGCCTACTATCCGACGAAACCACAAAGACGTATAAGTGGTTGTTGGAAACCTTTGTTGAAGCGATGGGTGGGAAAAGTCCAAAAGCAGTAATAACTGACGGAGACCTTGCCATGCGAGATGCAATCAAGAATGTTCTGCCTGATGCGACCCATCGGTTATGCGGCTGGCATCTGCAGAGAAATACATGTGAAAATATAAAGAATCCTAATTTCCTGCACGATTTTAAGGGTCTTATATACGACAACAACGACCAGAGAGACTTTGATCAGAGATGGGCAACCATTTTGGATAAGCACAACCTTGTTGGAAGTACCTGGATGGAGAAGATGTACGAAACTCGTGAGATGTGGTCCCATTGTTTCCTCCGGGATAAGTTTTTTGGTTACATAAGGACGACATCACAGTGTGAAGGTATAAATTCTCTCATCAGATTTTATGTTAATCGCAAGAACACCCTCATTGACTTCATGCATAACCTGGATAGGGCCTTAAAGGAGTATAGAAACAACAAATTAATAGCTGACTTTAAGTCTCAGTGCTCAGAGCCAGTGATGATTACCTCGTTGGAGGTATATGAAAGATCTGCATCATGTTATTTCACGCGAAACATTTTCAAGGAAATTCGTAATGAGATTCAGAGGGCAGGGGCTTTGAATATAACGGTACTAAGCACAACCTTGGACAAGGTAGAGTTCAGCGTGACTGCTCTCGGAGACCCGGCCAAAGATCGACGGGTGGAAGTCGATAGAGGTAAGAATCTGTTCTCGTGCTCGTGCAAGCTGTTTGAATCACGTGGTATTCCCTGTAGTCATATCTTCTGTGCCATGAAGTTCGAAAACATACTTGAGTTTCTAGATTCGTTAATATACAAAAGGTGGACAAAGAATGCAAAGAACGAATTTATTAGCACAGAAATGCCTGTGAATGATGACATCGAAAGGGTCTTAAAGTTTCGAGTTGGAGCGTTGGCATCGAATTGCAACAAGCTGTGTGACATTGCTTGCAAGGATCCTGCAGACTTTGATGAAGTCCAGTCTGAACTTGTCAATTTAGTTATCCGCCTGCAGTCACGCAAACAAGGCAAGTCAACTCCTAATGTTAACGTGGAAGGCATCAACGATCCCTTTGTTGTCAAAAGCAAAGGAGCCCCTTCCAAGAGGTCTTCTTGGAGGAAGAAGAGAGCATGCTCTAATTGCCACAAGTACGGTCATTACTACAAGCGCTGTCCAGATCTGATGCAGCATAGTGTGGAAGGACCTAATACCAAGCCTTTTAAAAAGGGTGGAACAAGGAAGTTTACGGCGACGGGTATGAGGAGCCGGAAGGGTAAAGACAACACTTTTGTCGAGCGGAGCCTCCATGAAAGCAGCGAATCCATTGACACGAATGGTGTTTTCAATAAAAATCTCGACTCGTTAACACAGGTGAAGGAGTCACAGCAGGACAAGATACATTCATTCACGAACTATGAATGCGATAATGATGTCATTGATGATAAATGTGACACACGACATGTGCAGATCGATGTCCGAGATCAGTTACCATCGTCACTGCCTTGTGGCAACAAACAAGGATCATACATGGCATTGTTCGCGTCGATGCATAGGACACTTTGA 2334 0.4284 MSIKEDEFKNDSDNNLGDDFDYQPNAEDDADDDDVDSLDSTSKSEEVCGVKRIADLMVEDIWNLEFRTEDEACQFYNAYSCWHGFVMRKDDVVRDNQDRIISRQLVCNKEGWRNMRYLDMDDRSREKGGYHHAGFTRKDLYNHIDRYRRKKVKNGDANAAINYLIGKSNNDPLFFGKYTFTSDERLEHIFWADGQSIIDYHCFGDIVAFDSTYKKNKYNKPLVIFSGCNHHGQTVIFGSGLLSDETTKTYKWLLETFVEAMGGKSPKAVITDGDLAMRDAIKNVLPDATHRLCGWHLQRNTCENIKNPNFLHDFKGLIYDNNDQRDFDQRWATILDKHNLVGSTWMEKMYETREMWSHCFLRDKFFGYIRTTSQCEGINSLIRFYVNRKNTLIDFMHNLDRALKEYRNNKLIADFKSQCSEPVMITSLEVYERSASCYFTRNIFKEIRNEIQRAGALNITVLSTTLDKVEFSVTALGDPAKDRRVEVDRGKNLFSCSCKLFESRGIPCSHIFCAMKFENILEFLDSLIYKRWTKNAKNEFISTEMPVNDDIERVLKFRVGALASNCNKLCDIACKDPADFDEVQSELVNLVIRLQSRKQGKSTPNVNVEGINDPFVVKSKGAPSKRSSWRKKRACSNCHKYGHYYKRCPDLMQHSVEGPNTKPFKKGGTRKFTATGMRSRKGKDNTFVERSLHESSESIDTNGVFNKNLDSLTQVKESQQDKIHSFTNYECDNDVIDDKCDTRHVQIDVRDQLPSSLPCGNKQGSYMALFASMHRTL* 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0956 777 Pfam MULE transposase domain 206 300 IPR018289 -
Ahy6g0956 777 ProSiteProfiles Zinc finger SWIM-type profile. 483 519 IPR007527 GO:0008270
Ahy6g0956 777 MobiDBLite consensus disorder prediction 1 42 - -
Ahy6g0956 777 MobiDBLite consensus disorder prediction 22 39 - -
Ahy6g0956 777 MobiDBLite consensus disorder prediction 1 16 - -
Ahy6g0956 777 Pfam FAR1 DNA-binding domain 74 119 IPR004330 -
Ahy6g0956 777 SUPERFAMILY Retrovirus zinc finger-like domains 621 653 IPR036875 GO:0003676|GO:0008270
Ahy6g0956 777 ProSiteProfiles Zinc finger CCHC-type profile. 635 650 IPR001878 GO:0003676|GO:0008270
Ahy6g0956 777 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 122 640 IPR031052 GO:0006355
Ahy6g0956 777 PANTHER OS02G0262500 PROTEIN 122 640 - -
Ahy6g0956 777 SMART 26again6 494 521 IPR006564 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0956 Ahy-Chr6 12599323 12602312 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Ahy6g0956 MULE 4.20E-28 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0956 - - ahf:112723022 1252.65