Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0943 ATGGCGAAGAAGGACAAAGCTAGGGTTCCCGATGACGAACAACAAATCGATTCTGAACCTAACAACAACCATCAGACCCTCTACGAGGTTCTTGGTGTGGAAAGAACTGCCTCTCAGCAGGAAATTAAGAAGGCATACTACAAGCTCGCATTGCGGCTTCATCCTGACAAGAACCCTGGCGATGAGGACCTCTCTGGTGATGTTGTTCGGAATCTTAGTGAGTTTTTCAGAACAATGTATAAGAAGGTAACTGAAGCTGATATTGAGGAGTTTGAAGCTAACTATAGGGGATCTGACTCAGAGAAAAATGACTTAATTGATTTGTACAAGAAGTGCAAGGGTAATATGGACAGGCTTTTTTGTTCAATGCTTTGTTCAGATCCTAAATTTGATTCACATCGATTCAAGGATATACTTGACGAGGCAATTGCTGCTGGAGAACTAAAGGAAACAAAAGCTTACCAAAAATGGGCAAAGAAAGTATCTGAAATCAAACCACCAACTAGTCCTTTAAAGAGGAGGGCGGAGTCCAGTAAGAAGCCAGAAACAGATCTTTATGCAATGATAGCACAACGCCAAAATCAGAGGAAAGATCGATTTGATTCATTGTTCTCATCACTGGCTTCAAAATATGGTGGAGGTGATATGCCTGAGCCCTCTGAAGAGGAATTTGAAGCTGCACAGAGAAAGCTGGATAGTGGAAGATCCTCAAAAAAGGCAAAGCAATCAAAGCGGAAGTAA 741 0.4184 MAKKDKARVPDDEQQIDSEPNNNHQTLYEVLGVERTASQQEIKKAYYKLALRLHPDKNPGDEDLSGDVVRNLSEFFRTMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGNMDRLFCSMLCSDPKFDSHRFKDILDEAIAAGELKETKAYQKWAKKVSEIKPPTSPLKRRAESSKKPETDLYAMIAQRQNQRKDRFDSLFSSLASKYGGGDMPEPSEEEFEAAQRKLDSGRSSKKAKQSKRK* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0943 246 CDD DnaJ 26 63 IPR001623 -
Ahy6g0943 246 MobiDBLite consensus disorder prediction 1 25 - -
Ahy6g0943 246 MobiDBLite consensus disorder prediction 165 184 - -
Ahy6g0943 246 MobiDBLite consensus disorder prediction 166 181 - -
Ahy6g0943 246 SUPERFAMILY Chaperone J-domain 24 83 IPR036869 -
Ahy6g0943 246 MobiDBLite consensus disorder prediction 222 238 - -
Ahy6g0943 246 ProSiteProfiles dnaJ domain profile. 26 110 IPR001623 -
Ahy6g0943 246 PRINTS DnaJ domain signature 28 46 IPR001623 -
Ahy6g0943 246 PRINTS DnaJ domain signature 46 61 IPR001623 -
Ahy6g0943 246 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 3 63 IPR042977 -
Ahy6g0943 246 MobiDBLite consensus disorder prediction 1 18 - -
Ahy6g0943 246 Pfam DnaJ domain 27 63 IPR001623 -
Ahy6g0943 246 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 62 242 IPR042977 -
Ahy6g0943 246 Gene3D DnaJ domain 11 118 IPR036869 -
Ahy6g0943 246 SMART dnaj_3 25 102 IPR001623 -
Ahy6g0943 246 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 62 242 - -
Ahy6g0943 246 PANTHER CHAPERONE DNAJ DOMAIN PROTEIN 3 63 - -
Ahy6g0943 246 MobiDBLite consensus disorder prediction 208 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0943 Ahy-Chr6 12350953 12353726 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0382 16 7409658 7412381 Ahy6g0943 6 12350953 12353726 hybridization
Ahy6g0943 6 12350953 12353726 Ahy12g1605 12 86813736 86816817 PCT
Ahy6g0943 6 12350953 12353726 Ahy2g1362 2 72228242 72231300 PCT
Ahy12g1605 12 86813736 86816817 Ahy6g0943 6 12350953 12353726 PCT
Ahy2g1362 2 72228242 72231300 Ahy6g0943 6 12350953 12353726 PCT