Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0941 ATGGAGACAGATAACAACAGTGAGTCAAAGTCAAAGAAGATGGAAGACTATGAGGTGATAGAGCAAATTGGAAGAGGAGCATTTGGTTCTGCTTTTCTGGTTCTTCACAAGTCTGAGAAGAAGAGATATGTGCTGAAAAAGATTCGCTTGGCAAAGCAAACTGAGAAGTTCAAAATTACAGCACACCAAGAGATGAATCTGATTGCAAAACTAAATAACCCATATATTGTGGAATACAAAGATGCTTGGGTGGAGAAGGAGGACCATATATGCATTGTTACTGGCTACTGTGAAGGAGGTGACATGGCTGAGTACATAAAGAAATCGCGCGGATCATTTTTCCCTGAGGAGAAGGTCTGCAAATGGCTCACTCAATTGTTGATAGCTGTGGACTACTTGCACTCTAATCGTGTGATCCATAGAGATCTTAAGTGTTCCAACATATTCCTCACAAAAGACAATAACATTCGGCTTGGTGACTTTGGTCTTGCGAAACGGCTTAATCCAGAAGATCTTGCTTCCTCGATTGTTGGAACTCCAAATTATATGTGCCCTGAGCTTCTAGCTGATATACCTTATGGTTATAAATCTGACATGTGGTCGCTCGGTTGCTGCATGTTTGAGATTGCTGGACACCAACCAGCATTTCGTGCTCCGGACATGGCTGGACTTATTAATAAAATTAACAGATCCTCCATTTCTCCATTGCCAATTATTTATTCTTCCACACTGAAACAACTTATTAAGAGCATGCTGAGGAAAAACCCAGAACATAGACCAACAGCTGCCGAATTGTTACGCCATCCTCTTTTACAGCCTTATGTTCTCCGCTGTCAAAACGCATCATCCAATTTTCTTCCAGTATACCCCATAGTTAACTCAAAGGATAAAACAAAAAGATCTAAAAAATCTAGTGGTGGCAAGGACCAGAGGGACAAAGACACAACATCACCAAATTATTTGGAAAGGATTCATCCGATTGAGGGAAATGGACACTTACAGCCGAGGAATCTTCCAAGTGAGGGAGAGCTAACAGCTTCAACAAGTGCAGAAGACAACCTCGAGAACCGGATGGTTGATCTTACAAGCTATATAGTGGAATCTTCTACTAGTATTAGTGGCTCAAAAGATGGATCAACAACATCAGAATCAACTATTTGTAGTGTGTGTAGGGACCCTGACTTTAAAACTAGGCCTGCAAAGGAAACTGCAAATATTGAAATCACTTCAAAGAGTACACAAGATTCTGTGCATCAAGATCATGAATTTGCTGCTGAACTTCTTCAAAACTTAGAAGGGATTGACATAAATGCTGTTACAACACTAGTTGAAGATGCTTTTTCGGATGACGGTGCTAACAATGCTGAAGCAGATAGAGAAGATGCCAAACTTGAAGACTCAAGGAAATCGGCTTCCAGTGCTGAAGCACAGAGAGAAGATGCCAAACTTGTGGACTCCATGAAATCAACAACTTCCAGTGCAGGCACCAGCAGCACTGGTAAAGATAAGTCTATTGATGAGGAAAGGTTGTTGCCGATTCTGCATCCTGTTAAGGTTGAATGTGACACCAAATCCGGAACCAGCTTGAAGGAAATCGAAAATCCTGATGCATCGAAGGAAGGCTCACAATTGAACTACTTGTCATCTGAAAGTAATGATACTCCTCCAGTCAAGGATGAATGCTCCATGCATAAAGATGAAAATGCCAATGCAGTTGATCAGACACTGAATGGCATTTCGTTAAGCACTTCGACAATCAGCGACGAAACAACGAAGTCAGAGTTGGATAGTCCTTCCCAGCAAAGGGCTGAGGCTCTTGAATCTCTGCTTGAGTTATGTGCTCAGCTACTCAAGCAAGATAAGCTCGAAGAGCTTGCGGCTGTGCTAAGACCGTTCGGAAAAGAAGCTGTCTCATCCAGAGAAACAGCAATATGGCTGACAAAGAGCCTTATATCAGCACAGAAGTTTAATCCTGAAAGCTAG 1983 0.4191 METDNNSESKSKKMEDYEVIEQIGRGAFGSAFLVLHKSEKKRYVLKKIRLAKQTEKFKITAHQEMNLIAKLNNPYIVEYKDAWVEKEDHICIVTGYCEGGDMAEYIKKSRGSFFPEEKVCKWLTQLLIAVDYLHSNRVIHRDLKCSNIFLTKDNNIRLGDFGLAKRLNPEDLASSIVGTPNYMCPELLADIPYGYKSDMWSLGCCMFEIAGHQPAFRAPDMAGLINKINRSSISPLPIIYSSTLKQLIKSMLRKNPEHRPTAAELLRHPLLQPYVLRCQNASSNFLPVYPIVNSKDKTKRSKKSSGGKDQRDKDTTSPNYLERIHPIEGNGHLQPRNLPSEGELTASTSAEDNLENRMVDLTSYIVESSTSISGSKDGSTTSESTICSVCRDPDFKTRPAKETANIEITSKSTQDSVHQDHEFAAELLQNLEGIDINAVTTLVEDAFSDDGANNAEADREDAKLEDSRKSASSAEAQREDAKLVDSMKSTTSSAGTSSTGKDKSIDEERLLPILHPVKVECDTKSGTSLKEIENPDASKEGSQLNYLSSESNDTPPVKDECSMHKDENANAVDQTLNGISLSTSTISDETTKSELDSPSQQRAEALESLLELCAQLLKQDKLEELAAVLRPFGKEAVSSRETAIWLTKSLISAQKFNPES* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0941 660 MobiDBLite consensus disorder prediction 296 319 - -
Ahy6g0941 660 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 501 643 - -
Ahy6g0941 660 CDD STKc_Nek 16 271 - -
Ahy6g0941 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Ahy6g0941 660 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0941 660 Gene3D Transferase(Phosphotransferase) domain 1 99 325 - -
Ahy6g0941 660 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0941 660 PANTHER SERINE/THREONINE-KINASE NEK7-LIKE PROTEIN 11 478 - -
Ahy6g0941 660 MobiDBLite consensus disorder prediction 296 355 - -
Ahy6g0941 660 SUPERFAMILY Protein kinase-like (PK-like) 14 305 IPR011009 -
Ahy6g0941 660 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 11 478 - -
Ahy6g0941 660 MobiDBLite consensus disorder prediction 525 562 - -
Ahy6g0941 660 Pfam Protein kinase domain 17 270 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0941 660 ProSitePatterns Protein kinases ATP-binding region signature. 23 46 IPR017441 GO:0005524
Ahy6g0941 660 Gene3D Phosphorylase Kinase; domain 1 1 96 - -
Ahy6g0941 660 MobiDBLite consensus disorder prediction 340 355 - -
Ahy6g0941 660 MobiDBLite consensus disorder prediction 450 509 - -
Ahy6g0941 660 MobiDBLite consensus disorder prediction 486 500 - -
Ahy6g0941 660 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 501 643 - -
Ahy6g0941 660 MobiDBLite consensus disorder prediction 452 485 - -
Ahy6g0941 660 MobiDBLite consensus disorder prediction 538 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0941 Ahy-Chr6 12318157 12323459 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0941 10 272 MAP Kinase Kinase Kinase AT3G13530 32.075 1.70e-37 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Ahy6g0941 Pkinase 8.70E-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0941 K08857 - gmx:100793379 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0383 16 7423021 7428417 Ahy6g0941 6 12318157 12323459 hybridization
Ahy6g0941 6 12318157 12323459 Ahy12g1603 12 86780170 86788517 PCT
Ahy6g0941 6 12318157 12323459 Ahy2g1361 2 72135136 72143464 PCT
Ahy12g1603 12 86780170 86788517 Ahy6g0941 6 12318157 12323459 PCT
Ahy2g1361 2 72135136 72143464 Ahy6g0941 6 12318157 12323459 PCT