Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0901 ATGGAGGCAACAATATTATGTGACAATAATAATAATAAAGGGTTGTTGTTGGAATGTGGTGGTGGTGGTGGTGGTGGAAGGAAGTGCAATAATCCACCACCCTTCTTGTTGAAGACATACATGCTTGTGGAGGATCCGGCCACCGACGAAGTCGTATCGTGGAATGCCGACGGCACGGCGTTCGTGGTGTGGCAGCCGGCGGAGTTTGCCCGTGATCTCCTCCCTACACTCTTCAAGCATAGCAACTTCTCTAGCTTCGTCCGCCAGCTCAATACCTATGGTTTTCGTAAAGTTGCAACAAGCAGATGGGAATTCTCCAATGAGAAGTTCAAGAAAGGCGAAAGAGAAATGCTATGTGAAATTCGAAGAAGAAGAGCATGGACAAGCAAGCAACGGAATGCAGCAGCAAACCAAGGTGCACCCCAAGACTCCGATGAAGATCAAAGGTCTTCATCGACTTCTTCGTCTTCGGGTTACACCACTCTAGTTGATGAGAACAAGCGCCTCAAGAAGGAGAATGGGGTGTTGAGTTCAGAGCTCACAACCATGAAGAGGAAGTGTAGGGAACTGCTTGATTTGGTGGCGAAATACTCGCATGCTCAAGAGGAGGAAGAGGATGAGGACGAGGATGAGAATGAGGCCGAGGCCGGAAGGCCAATGCTGTTTGGAGTAAGATTGGATGTTCAAGGGCAGAGGCAGGTGAAGAGGAAGAGAGACGAGATACGTGAAAGCGCAAGCATTTTGCTCTCTCAATCATGCAAATAG 765 0.4863 MEATILCDNNNNKGLLLECGGGGGGGRKCNNPPPFLLKTYMLVEDPATDEVVSWNADGTAFVVWQPAEFARDLLPTLFKHSNFSSFVRQLNTYGFRKVATSRWEFSNEKFKKGEREMLCEIRRRRAWTSKQRNAAANQGAPQDSDEDQRSSSTSSSSGYTTLVDENKRLKKENGVLSSELTTMKRKCRELLDLVAKYSHAQEEEEDEDEDENEAEAGRPMLFGVRLDVQGQRQVKRKRDEIRESASILLSQSCK* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0901 254 PANTHER HEAT STRESS TRANSCRIPTION FACTOR B-3 30 254 - -
Ahy6g0901 254 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 30 254 IPR027725 -
Ahy6g0901 254 MobiDBLite consensus disorder prediction 199 241 - -
Ahy6g0901 254 Pfam HSF-type DNA-binding 35 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy6g0901 254 MobiDBLite consensus disorder prediction 130 163 - -
Ahy6g0901 254 PRINTS Heat shock factor (HSF) domain signature 73 85 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy6g0901 254 PRINTS Heat shock factor (HSF) domain signature 35 58 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy6g0901 254 PRINTS Heat shock factor (HSF) domain signature 86 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy6g0901 254 SUPERFAMILY "Winged helix" DNA-binding domain 30 124 IPR036390 -
Ahy6g0901 254 MobiDBLite consensus disorder prediction 130 164 - -
Ahy6g0901 254 Gene3D - 27 125 IPR036388 -
Ahy6g0901 254 ProSitePatterns HSF-type DNA-binding domain signature. 74 98 IPR000232 GO:0003700|GO:0006355|GO:0043565
Ahy6g0901 254 SMART hsfneu3 31 124 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0901 Ahy-Chr6 11553694 11557332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0901 32 197 HSF AT2G41690 61.111 1.01e-72 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Ahy6g0901 HSF_DNA-bind 5.80E-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0901 K09419 - gmx:100802739 332.798
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0427 16 8160371 8163904 Ahy6g0901 6 11553694 11557332 hybridization