Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0899 ATGTTGCCTGTTATTATGGCTCCAACAACAATGGAGTTGCATGATGGTGGTGCAATCATGGAGAGTGATAATAATATTAGAGAAGTGTGCTTGGTTTGGGAGAATTTGGAAGTGGAAGTAGTAAGCAGTTATAGTAGTGAAAGAAGGAAGAAAGTGTTAAATGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACTTTCCTTGATGCTCTTGCTGGAAGGCTTGGCGGCAATGTTAGAATCACTGGAAATGTAACACTGAATGGGACTAAGACAATTACAAGCTGCAAAAACATTAATTATGTAACTCAAGAAGACTATTTCCTGGGAACTCTAACAGTGAGGGAAACACTAACATATGCTGCTCATCTGAGACTTGCTGCAAACAAGAGCAAAGATGAGATTGACAAGGTTGTAGTCAAGACGCTCGATGAAATGGGTCTTAAAGAATGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATAAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAAATCTTAACTCAGCCTCATATACTGTTGCTTGATGAACCTACCAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCACAAGCATAGCACATAATGGAAGAATAGTATTATGCTCCATTCACCAACTTAGCAGTGAAGTCTTCAATCTCTTTGATGATTTGGTGCTCCTTGCAGCAGGTGAAACTGTCTATTTTGGAGAAAGAACTAATGCTATTAAGTTCTTTGCTGATGCAGGGTTTCCTTGTCCAACAAGAAAGAATCCTCCGGAGCACTTCCTTCGATGCGTTAGTCCAGAGTTTGATAATGTTCTAAGTCTAATGCGGTCCAAAAATGTCAATGATACCCCATCATCATGGAATTCTTTAGTGAATATGACTACAGAGGAGACCAAATGGAATCTGATAAACAGTTTCAAGAATTCCATGCATTCAGCAAATGTGAGAGAAAAAATCAGAGAAATCAAACTAAGAAAAGAACCTGTTATTGACAGAGCATATGATACTAGCACATTGAAGCAGCTATGTACTTTGACTCACAGATCATTCCTTAACATGACTAGAGACATCGGTTACTACTGGTTAAGGATCTTGTTCTACATCTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACAAGTAATAATGCAATCTTGCCAAGAAGCAAGTGTGATGGATTCATCTATGGCTTTATGACCTTCCTTTGCATTGGTGGAATGCCCTTCTTCCTTGAGGAGTTAAAGGTGTTCGAAGGCGAAAGGTTCGGGAGGCATTATGGCGAGGCCATTTACGTGTTGTCGAGTTTCATGTCATCACTCCCTTTTGTTGTTGCCATTTCCCTGACTTCAGGAACAATACTTTACCACATGGTGAATTTTCACCCTGGATTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGCTCCATGCTTGTGGTTGCAGCACTAGTCTCCAACCAATTGCTAGCTATTGTAACTGCAGCTGGTGTAACTGTACTCATGTTGATGCCATCAAATGTATCCAGAAGGATAACAGACATTCCTAACTTCTTCTGGCGCTATCCAATGTCCTACATCAGTTATATTGCATGGTCCATAGAGGGTCAATACAAGAATGACTTCGTTGGACTTGAATTTGAACCACTGATACCTGGGGATAGGAAGATAAAAGGTGAGGTGATACTTAAGGAAATACTTGGGATCCAAACAGATTATTCAAAGTGGTGGGATGTTGGAGTTCTGGTTTTGTTGTTAATATCTTATAGAGTGCTCTTTTACTTGGCTCTTAAGCATAGGGAGAGAGCTTCATCAATATTTCGCACCAGAATGAGTGAATGA 1944 0.4033 MLPVIMAPTTMELHDGGAIMESDNNIREVCLVWENLEVEVVSSYSSERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLGGNVRITGNVTLNGTKTITSCKNINYVTQEDYFLGTLTVRETLTYAAHLRLAANKSKDEIDKVVVKTLDEMGLKECAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLTSIAHNGRIVLCSIHQLSSEVFNLFDDLVLLAAGETVYFGERTNAIKFFADAGFPCPTRKNPPEHFLRCVSPEFDNVLSLMRSKNVNDTPSSWNSLVNMTTEETKWNLINSFKNSMHSANVREKIREIKLRKEPVIDRAYDTSTLKQLCTLTHRSFLNMTRDIGYYWLRILFYILVSVCAGFLYLNVGTSNNAILPRSKCDGFIYGFMTFLCIGGMPFFLEELKVFEGERFGRHYGEAIYVLSSFMSSLPFVVAISLTSGTILYHMVNFHPGFSHYCYFCINLFCSISVTEGSMLVVAALVSNQLLAIVTAAGVTVLMLMPSNVSRRITDIPNFFWRYPMSYISYIAWSIEGQYKNDFVGLEFEPLIPGDRKIKGEVILKEILGIQTDYSKWWDVGVLVLLLISYRVLFYLALKHRERASSIFRTRMSE* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0899 647 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 36 276 IPR003439 GO:0005524
Ahy6g0899 647 SMART AAA_5 62 253 IPR003593 -
Ahy6g0899 647 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 44 267 IPR027417 -
Ahy6g0899 647 Gene3D - 26 270 IPR027417 -
Ahy6g0899 647 CDD ABCG_EPDR 31 258 - -
Ahy6g0899 647 Pfam ABC-2 type transporter 233 336 IPR043926 GO:0140359
Ahy6g0899 647 Pfam ABC-2 type transporter 365 573 IPR013525 GO:0016020|GO:0140359
Ahy6g0899 647 Pfam ABC transporter 53 204 IPR003439 GO:0005524
Ahy6g0899 647 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 30 640 - -
Ahy6g0899 647 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 30 640 - -
Ahy6g0899 647 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0899 Ahy-Chr6 11491972 11496762 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0899 43 245 Calmodulin-binding Proteins AT2G36910 29.680 9.59e-10 60.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0431 16 8210074 8215899 Ahy6g0899 6 11491972 11496762 hybridization