Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0897 ATGGAGTTGCATGCAGAAGTGATGGAGAATGAAAATAAGAATAAGAATAATAATGTTGTTATTAGGAGGGAAGTGTGTTTGGTTTGGGAAGAATTGACAGTGGTTATTAACAGCGGCAAGAGCAGTAATAATAATAGTGAAAGAAGGAAGAAAGTGTTGAACGGAATAAGTGGATATGCTGAACCAAACAGAATCATGGCTCTAATTGGTCCTTCTGGTGCTGGCAAATCCACCTTCCTTGATGCTCTTGCTGGAAGACTTGCAACCAATGTCAGCATTACTGGAAATGTGCTATTGAATGGCACTAAGAGAACCACATCCTCCAGAGATCTTTCTTATGTAACACAAGAAGACCATTTCTTAGGAACACTAACTGTGAGGGAAACACTCACATATGCTGCTTATCTGAGACTTGCTGCAAACATGGCCAATGATGAGATTGACAAGGTTGTAGCCAAGACGCTCGACGAAATGGGTCTTCAAGATTGTGCAGAGAGCAGGCTTGGGAATTGGCATTCAAGAGGAATTAGTAAAGGAGAGAAGAGAAGACTCAGCATTGGCATTGAGATCTTAACTCAGCCTCATATACTTTTGCTTGATGAACCTACTAGTGGATTGGATAGTGCTGCTGCTTTCTTTGTCATTTCATCTCTCAGAAGCATTGCACATGATGGCAGAATTGTTATCTGCTCCATTCACCAACTTAGCAGTGAAGTTTTCAATCTCTTTGATGACATGGTGATCCTCGCAGGAGGCGAAACTGTGTATTTTGGAGAAAGGACTAAAGCTGTTAAGTTCTTTGAAGATGCAGGGTTTCCTTGTCCAACAAGAAAGAACCCTCCTGAACACTTCCTTCGTTGCGTCAGCCCCGAATTCGATAGTGTTCTGACTTTGATACAGTCCAAGAATGCCAATAATGAAGCACCATCATCATGGAATTCTCTAATGAATATGACAACAGAGGAGATTAAATGGAAACTTATAAACTGTTTCAAGAATTCTAGGCAGTTAGCAAATGCAAGGGAAAAGATCAGAGAAATCAAACTAAGAAAAGAACCTTCAATAGAGAGGGCATATGATACTAGAACACTGAAGCAGCTATGCACATTGACTCATAGATCATTCCTTAACATGACCAGAGACATTGGTTACTATTGGTTAAGGATTCTGTTCTACATGTTAGTATCAGTGTGTGCTGGTTTTCTTTATCTAAATGTAGGAACTAGTAATAGTGCAATCTTATCAAGAAGCAAGATTGATGGATTCATCTATGGCTTCATGATCTTTCTGTGCATTGGTGGCTTACCCTTCTTCCTTGAGGAGTTAAAGGTCTTCGAGCGCGAAAGATTCGGAAGGCATTATGGAGAGGGAGTTTTTGTTCTTTCGAGTTTCATCTCGTCACTTCCTTTTGTTGTTTTCATTTCCCTGACTTCAGGAACAACACTTTACCACATGGTGAATTTTCACCCTGGTTTCTCTCATTACTGCTACTTTTGCATAAACCTCTTCTGCAGCATTTCTGTCACAGAAGGCTCCATGCTTTTAGTTGCTGCTCTTGTTTCCAACCAGCTCCTAGCTATTGGAACATCAGCTGCTATAACTATACTGATGATGATGCCATCAAATGCATTTCGAAGAATGATTGACATTCCGAAATTCTTCTGGCGCTATCCCATGTCCTACATCAGTTATATCGCGTGGTCAATACAGGGGCAATACAAGAATGACCTGATTGGACTTGAATTTGAAGGAATGATGCCAGGAGACAGAAAGATAAAGGGTGAAGTGATACTTGAAGAAATGTTTGGAATAAGAACAGATTATTCAAAATGGTGGGACATAGGAGCCTTGGTTTGCTTGTTAATATCATACAGATTGATGTTTTTCTTGGTTCTTAAGCATAGGGAGAGAGCTTCATCACTATTTCACACCATTTTACTCACAAGATCCTCCCTCAAACTCAATCTCAATCTCAATCTCAATCTCAATCACAAACATATTTCTTCCAAGAGACACCATTCCCTATATCCTTTCTCATCTCAACATGGATTTACCCCTCCAACAATATCCTAG 2073 0.4004 MELHAEVMENENKNKNNNVVIRREVCLVWEELTVVINSGKSSNNNSERRKKVLNGISGYAEPNRIMALIGPSGAGKSTFLDALAGRLATNVSITGNVLLNGTKRTTSSRDLSYVTQEDHFLGTLTVRETLTYAAYLRLAANMANDEIDKVVAKTLDEMGLQDCAESRLGNWHSRGISKGEKRRLSIGIEILTQPHILLLDEPTSGLDSAAAFFVISSLRSIAHDGRIVICSIHQLSSEVFNLFDDMVILAGGETVYFGERTKAVKFFEDAGFPCPTRKNPPEHFLRCVSPEFDSVLTLIQSKNANNEAPSSWNSLMNMTTEEIKWKLINCFKNSRQLANAREKIREIKLRKEPSIERAYDTRTLKQLCTLTHRSFLNMTRDIGYYWLRILFYMLVSVCAGFLYLNVGTSNSAILSRSKIDGFIYGFMIFLCIGGLPFFLEELKVFERERFGRHYGEGVFVLSSFISSLPFVVFISLTSGTTLYHMVNFHPGFSHYCYFCINLFCSISVTEGSMLLVAALVSNQLLAIGTSAAITILMMMPSNAFRRMIDIPKFFWRYPMSYISYIAWSIQGQYKNDLIGLEFEGMMPGDRKIKGEVILEEMFGIRTDYSKWWDIGALVCLLISYRLMFFLVLKHRERASSLFHTILLTRSSLKLNLNLNLNLNHKHISSKRHHSLYPFSSQHGFTPPTIS* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0897 690 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 26 648 - -
Ahy6g0897 690 PANTHER CASSETTE TRANSPORTER, PUTATIVE-RELATED 26 648 - -
Ahy6g0897 690 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 49 270 IPR027417 -
Ahy6g0897 690 Gene3D - 34 270 IPR027417 -
Ahy6g0897 690 SMART AAA_5 62 253 IPR003593 -
Ahy6g0897 690 Pfam ABC-2 type transporter 366 572 IPR013525 GO:0016020|GO:0140359
Ahy6g0897 690 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 27 276 IPR003439 GO:0005524
Ahy6g0897 690 CDD ABCG_EPDR 27 258 - -
Ahy6g0897 690 Pfam ABC-2 type transporter 233 316 IPR043926 GO:0140359
Ahy6g0897 690 Pfam ABC transporter 53 204 IPR003439 GO:0005524
Ahy6g0897 690 ProSitePatterns ABC transporters family signature. 176 190 IPR017871 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0897 Ahy-Chr6 11458263 11462757 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0897 51 245 Calmodulin-binding Proteins AT2G36910 27.962 4.60e-08 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0897 - K05681 aip:107646291 1290.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0432 16 8229755 8234338 Ahy6g0897 6 11458263 11462757 hybridization