Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0881 ATGGATCACAGAACAAAGTCGAAGGACTCGCTCAACTACTCTACTCTCTTCAATCTCGAGTCTTTGATGAACTTTCAACTTCCAGAACAAGATGATGATTTCGATTATTACGAAAATAGTAGTCAGGATGAGAGCAGAGATAGCCAAGTAGGTAGGGCTGTTGCAAATTACAGTAATGGGAATATGCGTGGTAAGGAGGTGAGTTCGGCGAAGAAGAGGAAGTGGTCTCAGAACGGGGACAATGAGGAAAGGAGCTGTTATTACAGGACACACGTGACGGAAGAGCGATATAGGTCGATGCTTGGAGAGCATATTCAGAAATACAAGAGGAGGTTTAATGATAACTCATCTAGTCCTGCTCAAAATCAGGTTGTTGCTCCTCTTCTCAAAAGTAGCGTGGGTTCAAAAGCTCACAAGTCAGGGACTGAACTCAGGAGGGGACTACATGCTGCAGAGACTACATCTGAGTGGATGAATGGTTCCAATTCTCAGAAAATGGGAAATTACCGTGATTCCGATCTCTTGAAGCAATATTGCCCCAATAGGACAATATATGAACCTGCTTTTTTGGATATTGGGGATGGTATCACTTACAAGATTCCTCCAAGATATGATAAGTTAGCTGCATTGCTCAACCTTCCTACCTTCTCAGAGATCCATGTTCAGGATTTCTACTTAAAGGGTACCTTGGATTTGGGATCCTTGGCTGAAATGATGGCTGCTGATAAAAGATTTGGGAACAGAAACCGGATAGGCATGGGGGAAACCATACCCCACTATGAATCACTTCAGGCACGATTGAAGGTCATGTCAGCTTCTAATTCACCTCATAAGTTCAGTCTGAAAGTATCAGACTTGAACTCCTCCATTCCCGAGGGGGCTGCTGGAAACATCAAGCGATCTATTCTGTCCGAGGGTGGTGTATTGCAGATTTACTATGTGAAGGTTTTGGAGAAAGGGGACACTTATGAGATCATTGAACGAAGCCTACCCAAGAAGCAAAAGGTAAAGAAAGACCCTGCTTTGATAGAGAAGGAGGAAATGGAAAGAATTGGTAAGATTTGGGTGAACATTGTTAGAAGAGATATACCCAAGCATCAGAGGAACTTCACTGCTTTGCATCGAAAGCAGCTTGTTGATGCCAAGAGGTTTGCTGAGAACTGTCAGAGAGAGGTTAGGCTGAAAGTGAGTAGATCAATTAAATGGACGCGGACTGCTGGTATACGCACCCGAAAACTTGCTAGAGACATGTTGCTATTCTGGAAGCGAATAGATAAGGAGATGGCAGAAGTACGGAGACGAGAGGAGAAAGAAGCCGCTGAAGCTTTGAGGCGTGAACAGGAGCTTCGTGAAGCAAAGCGGCAGCAGCAAAGGCTGAATTTTCTTATACAGCAAACTGAGCTGTACAGTCACTTTATGCAGAACAAGTCAAGCTTGATATCAGAAGCTTTACCCATGGGTGATGAAAGTACAAATGACCAAGATCTAATTGACTCTTCAACTTTTGGGCGTAATGAGGAGGAAGATCATGAAGAGGCTGAGTTGAAGAAGGAAGCTCTGAAGGCTGCTCAAGAAGCTGTTTCCAAACAGAGAAGATTGACAAGTGCTTTTGACACTGAGTGCTTGAGGCTGCGCCAGGCTGATGAAGCTGATTTACTCCAACCAGAAGTTGCTGGAGCAAGTAATATTGATTTACAAACCCCCTCAACCATGCCAGTGGCCTCCACAGTTCGGACACCAGAATTGTTTAAAGGTGTTCTCAAAGAGTATCAGCTAAAAGGTCTTCAATGGCTAGTTAATTGTTATGAGCAGGGTTTAAATGGTATTCTTGCGGACGAGATGGGTCTTGGAAAGACCATTCAGGCTATGGCTTTTTTAGCCCATCTAGCTGAGGAGAAAAACATATGGGGACCTTTCCTGGTTGTTGCACCTGCATCTGTATTAAACAATTGGAATGAGGAACTTGAGCGCTTTTGCCCTGAACTGAAAAGACTTCCTTATTGGGGTGGGGTTGCAGAGCGGTCAGTGCTTAGGAAAAGTATTAACCCAAAGGATCTTTATCGCAGGGAAGCCAAATTTCATGTCCTCATCACAAGCTATCAGTTATTAGTTACTGATGAGAAGTTTTTTCGTCGTGTAAAATGGCAGTACATGGTTTTAGATGAAGCCCAGGCAATTAAAAGTTCTGCCAGTATAAGATGGAAGACGCTCCTAAGTTTTAATTGTCGGAATCGCTTACTGCTGACTGGTACACCTATTCAGAATAATATGGCAGAGTTGTGGTCTCTTTTGCATTTCATTATGCCAACATTATTTGACAGCCATGAGCAGTTTAATGAGTGGTTTTCAAAAGGAATTGAGAACCATGCTGAACATGGGGGTACTTTGAATGAGCACCAACTGAATAGATTGCATTCAATCTTAAAGCCGTTCATGCTGCGCCGTGTTAAAAAAGATGTAATCTCTGAGCTGACCACTAAAACTGAAGTTACAGTTCACTGCAAGTTGAGTTCTCGACAACAGGCTTTCTATCAAGCAATTAAAAACAAGATATCTCTCGCTGAACTGTTTGATAGTAATCGTGGACAGCTCAATGAGAAGAGAATTTTGAATTTAATGAACATTGTTATTCAACTAAGGAAGGTTTGCAACCATCCAGAATTATTTGAAAGGAGTGAGGGAAGCACATACCTTCATTTTGGAGAGATTCCAAATTCTCTTCTACCTCCTCCATTTGGGGAGTTGGAGGATGTATACTATTCTGGGGGTCACAACCCCATTTCATACGAGATACCAAAACTTGTGTATCGAGAAATTATGCAGAGTTCTGAGACTCTTGGTTCAGCTGTTGGTCATGGTGTCTGCAGAGAATCTTTTCTGAAACATTTTAATATTTTTAGACCAGAAAATGTTTATCGATCTGTTTTCCCAGAAGGTATGTGTGTTAGCAGTGGAGGCTTTGGTTTTACCCATATGACGGATTTGTCTCCACAAGAGGTGGCATTTTTGGCTAATGGTTCTTTTATGGAGCAATTGTTATTTTCTATGATGAGATCGGATAAAAAATTCATCGATGAAGTTGTAGATTTTCTTGTTGAGACCATAGATGATGATGATCCAGAATGTAGTAATCTTGAGAAAGGGAAAGTGAGAGCTGTTACTCGAATGTTATTGGTGCCATCAAAATCTGAAACTCAGTTTCTTCAAAGAAGATTTCCAACTGGGCCCAGCCATGCTCCTTTTGAGGCCTTGGTAGTCTCAGATCAGGATAGACTTTTGTCAAATGCAAGGCTGCTTCACTCGGCATACACATATATCCCACGGAGTAGAGCTCCCCCAGTTGGTGTTCACTGCTCTGATAGAAACTTTTACTATAAAATGATTGAAGAATTCCACAATCCTTGGATTAAGAGGTTGTTTGTGGGATTTGCACGTACATCTGAATGTAACGGGCCGAGAATGCCAGATTGTCATCATTTAATTGAAGAAATAGATTCTGAACTACCTGTTTCTCAGCCTGCTCTACAGTTAACACACAGTATTTTTGGGTCTTCTCCACCTATGTGGAATTTTGACCCAGCAAAGTTGTTGACTGACTCTGGGAAGCTTCAAACGCTTGATATATTATTGAGACGCTTAAGAGCTGAAAATCATCGTGTTCTTTTGTTTGCCCAGATGACTAAGATGCTGAACATTTTGGAGGACTATATGAACTACAGAAAATATAGGTATTTCAGACTTGATGGATCATCTACTATACAAGATCGTAGAGACATGGTCAGAGACTTCCAGAATAGGCCTGATATTTTTGTGTTCTTGTTGAGTACAAGAGCTGGTGGACTTGGCATCAACTTGACAGCTGCTGACACAGTCATATTTTACGAGAGTGATTGGAATCCAACATTAGATCTACAGGCAATGGACAGAGCTCATCGTTTGGGTCAGACAAGAGATGTTACTGTTTACCGACTTATATGCAAAGAGACAGTTGAAGAAAAAATTCTTCATAGAGCAAGCCAGAAAAGTACTGTACAAAACCTTGTAATGACTGGGGGTTCTGTTGGTGGTGATCTTTTAGCTCCTGAGGATGTTGTTTCTTTGCTTCTAGATGATCCCCAGTTGGAGCAGAAATTAAAGGAAATTCCCCTCCAGGCAAAGGATAAGCAAAAGAAAAAACAACCTGCAAGGGGCATTTTCTTAAATGAAGAAGGTGATGCATCTCTTCAAGATTTAACCAACGCTGTACCCCAGGGTACTGTGGATAATGATCTTACTGTGGACACAGAGGGTTCAAAGTCTGCTAATAAAAAGAGAAAAGCTGCCTCGGATAAGCAGACTTCAAGGCTGAAGAGTTCTCAGAAGATAAGTGATGTCGGTATTACAGCCATGGACGACGAATTGGATGACCTGAACACTGATCCAGTTGGCCAGAAGCCCAAGAGACCAAAAAGGTTAAAGAAGAGTGTTAATGAGAGGTTCGAAGAGGCCTCTATTGGCACGGCCACTGCCGTCACAGAGCAGACCCAATATCCACCTCCACAGGATTTCACATCCATCGTTCCTAGAGCAGAAACGAGCCTAGACCCCTAA 4590 0.422 MDHRTKSKDSLNYSTLFNLESLMNFQLPEQDDDFDYYENSSQDESRDSQVGRAVANYSNGNMRGKEVSSAKKRKWSQNGDNEERSCYYRTHVTEERYRSMLGEHIQKYKRRFNDNSSSPAQNQVVAPLLKSSVGSKAHKSGTELRRGLHAAETTSEWMNGSNSQKMGNYRDSDLLKQYCPNRTIYEPAFLDIGDGITYKIPPRYDKLAALLNLPTFSEIHVQDFYLKGTLDLGSLAEMMAADKRFGNRNRIGMGETIPHYESLQARLKVMSASNSPHKFSLKVSDLNSSIPEGAAGNIKRSILSEGGVLQIYYVKVLEKGDTYEIIERSLPKKQKVKKDPALIEKEEMERIGKIWVNIVRRDIPKHQRNFTALHRKQLVDAKRFAENCQREVRLKVSRSIKWTRTAGIRTRKLARDMLLFWKRIDKEMAEVRRREEKEAAEALRREQELREAKRQQQRLNFLIQQTELYSHFMQNKSSLISEALPMGDESTNDQDLIDSSTFGRNEEEDHEEAELKKEALKAAQEAVSKQRRLTSAFDTECLRLRQADEADLLQPEVAGASNIDLQTPSTMPVASTVRTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFLAHLAEEKNIWGPFLVVAPASVLNNWNEELERFCPELKRLPYWGGVAERSVLRKSINPKDLYRREAKFHVLITSYQLLVTDEKFFRRVKWQYMVLDEAQAIKSSASIRWKTLLSFNCRNRLLLTGTPIQNNMAELWSLLHFIMPTLFDSHEQFNEWFSKGIENHAEHGGTLNEHQLNRLHSILKPFMLRRVKKDVISELTTKTEVTVHCKLSSRQQAFYQAIKNKISLAELFDSNRGQLNEKRILNLMNIVIQLRKVCNHPELFERSEGSTYLHFGEIPNSLLPPPFGELEDVYYSGGHNPISYEIPKLVYREIMQSSETLGSAVGHGVCRESFLKHFNIFRPENVYRSVFPEGMCVSSGGFGFTHMTDLSPQEVAFLANGSFMEQLLFSMMRSDKKFIDEVVDFLVETIDDDDPECSNLEKGKVRAVTRMLLVPSKSETQFLQRRFPTGPSHAPFEALVVSDQDRLLSNARLLHSAYTYIPRSRAPPVGVHCSDRNFYYKMIEEFHNPWIKRLFVGFARTSECNGPRMPDCHHLIEEIDSELPVSQPALQLTHSIFGSSPPMWNFDPAKLLTDSGKLQTLDILLRRLRAENHRVLLFAQMTKMLNILEDYMNYRKYRYFRLDGSSTIQDRRDMVRDFQNRPDIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRAHRLGQTRDVTVYRLICKETVEEKILHRASQKSTVQNLVMTGGSVGGDLLAPEDVVSLLLDDPQLEQKLKEIPLQAKDKQKKKQPARGIFLNEEGDASLQDLTNAVPQGTVDNDLTVDTEGSKSANKKRKAASDKQTSRLKSSQKISDVGITAMDDELDDLNTDPVGQKPKRPKRLKKSVNERFEEASIGTATAVTEQTQYPPPQDFTSIVPRAETSLDP* 1530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0881 1529 Coils Coil 426 465 - -
Ahy6g0881 1529 Pfam SNF2-related domain 602 889 IPR000330 GO:0005524|GO:0140658
Ahy6g0881 1529 MobiDBLite consensus disorder prediction 66 81 - -
Ahy6g0881 1529 MobiDBLite consensus disorder prediction 1500 1521 - -
Ahy6g0881 1529 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 599 770 IPR014001 -
Ahy6g0881 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 570 815 IPR027417 -
Ahy6g0881 1529 SMART ultradead3 583 778 IPR014001 -
Ahy6g0881 1529 Pfam DNA-binding domain 349 477 IPR020838 GO:0003677
Ahy6g0881 1529 MobiDBLite consensus disorder prediction 1414 1529 - -
Ahy6g0881 1529 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 1205 1355 IPR001650 -
Ahy6g0881 1529 PANTHER CHROMATIN-REMODELING ATPASE INO80 16 1492 IPR031047 GO:0005634|GO:0006281|GO:0006338|GO:0006351|GO:0016887|GO:0031011
Ahy6g0881 1529 Pfam Helicase conserved C-terminal domain 1205 1314 IPR001650 -
Ahy6g0881 1529 MobiDBLite consensus disorder prediction 43 65 - -
Ahy6g0881 1529 Gene3D - 1174 1414 IPR027417 -
Ahy6g0881 1529 Coils Coil 503 530 - -
Ahy6g0881 1529 CDD SF2_C_SNF 1193 1325 - -
Ahy6g0881 1529 ProSiteProfiles DBINO domain profile. 354 479 IPR020838 GO:0003677
Ahy6g0881 1529 MobiDBLite consensus disorder prediction 1414 1429 - -
Ahy6g0881 1529 MobiDBLite consensus disorder prediction 1430 1445 - -
Ahy6g0881 1529 Gene3D - 825 895 IPR027417 -
Ahy6g0881 1529 MobiDBLite consensus disorder prediction 32 81 - -
Ahy6g0881 1529 PANTHER HELICASE SRCAP-RELATED 16 1492 - -
Ahy6g0881 1529 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 817 1382 IPR027417 -
Ahy6g0881 1529 Gene3D - 583 824 IPR038718 -
Ahy6g0881 1529 SMART helicmild6 1231 1314 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0881 Ahy-Chr6 11261703 11272275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0881 640 888 RAD5 or RAD16-like Gene Family AT1G61140 23.871 2.74e-11 66.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Ahy6g0881 SNF2_N 3.40E-66 CL0023
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0450 16 8403932 8414832 Ahy6g0881 6 11261703 11272275 hybridization