Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0847 ATGGGGATGGCTGCTGCAGCTGCTACAGAGTCACAGCAGTTTCATGTGTTGGCTGTTGATGACAGCCTCATAGATAGAAAGCTTATTGAGAGGCTCCTAAGAACTTCTTCTTACCAAGTTACTACAGTTGATTCTGGGACCAAAGCTTTAGAATTTCTGGGCTTGCGTGAGAATGATGATGGCACCCCAAATACACCTTCTATTTCTCCTAACAATCATCAGGAGGTGGAGGTGAATATGGTTATAACAGATTACTGTATGCCTGGGATGACTGGCTATGATTTGCTCAAGAAAATCAAGGAATCTTCATCTCTTAGAAACATACCAGTGGTGATTATGTCATCAGAGAATGTGCCTTCAAGAATTAGCAGATGCTTGGAGGAAGGAGCTGAAGAATTTTTCTTGAAGCCAGTGAGGCTTTCAGATTTGAATAGGCTCAAACCACATATAATGAAGAGGAGCAAGTTGAAAGATCAAGATCAAAAGCAAGTGATACCAGAAAAGATTGATACTTTATTAGAAGTTCAAAAGCAGCATCAACCACAAGAAGAAGCACAGCCACAAGTGCAACCAAATTTAGAACAACAACAACAACAACAATCACTGCAACAAAACAACAATAACAATAACAGCAGCAACAAGAGGAAGAGCATGGAGCAGAGCCTTTCACCAGAGACCACTGACAGAACTAGACCAAGATACAGTGGCATAGCCACTGTGGTATGA 726 0.4132 MGMAAAAATESQQFHVLAVDDSLIDRKLIERLLRTSSYQVTTVDSGTKALEFLGLRENDDGTPNTPSISPNNHQEVEVNMVITDYCMPGMTGYDLLKKIKESSSLRNIPVVIMSSENVPSRISRCLEEGAEEFFLKPVRLSDLNRLKPHIMKRSKLKDQDQKQVIPEKIDTLLEVQKQHQPQEEAQPQVQPNLEQQQQQQSLQQNNNNNNSSNKRKSMEQSLSPETTDRTRPRYSGIATVV* 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0847 241 ProSiteProfiles Response regulatory domain profile. 15 151 IPR001789 GO:0000160
Ahy6g0847 241 CDD REC_typeA_ARR 16 146 - -
Ahy6g0847 241 MobiDBLite consensus disorder prediction 177 233 - -
Ahy6g0847 241 Gene3D - 15 231 - -
Ahy6g0847 241 PANTHER TWO-COMPONENT RESPONSE REGULATOR 8 237 IPR045279 GO:0009736
Ahy6g0847 241 SMART REC_2 14 150 IPR001789 GO:0000160
Ahy6g0847 241 Pfam Response regulator receiver domain 16 143 IPR001789 GO:0000160
Ahy6g0847 241 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR9-LIKE 8 237 - -
Ahy6g0847 241 SUPERFAMILY CheY-like 13 164 IPR011006 -
Ahy6g0847 241 MobiDBLite consensus disorder prediction 177 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0847 Ahy-Chr6 10626232 10628614 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0847 1 241 Response Regulator Gene Family AT3G57040 60.156 1.13e-94 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Ahy6g0847 Response_reg 1.90E-19 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0847 K14492 - gmx:100788079 295.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0487 16 9054674 9057024 Ahy6g0847 6 10626232 10628614 hybridization