Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0834 ATGTCTTCTACACTTGAGGAATCTCTAAGATCTCTATCGTTGGATTACCTCAACCTGCTCATCAACGGTCAGGCCTTCAGCGACGTCACCTTCAGCGTCGAGGGGCGTCTAGTACACGCGCACCGCTGTATCCTGGCGGCAAGAAGTCTATTCTTCAGGAAATTCTTCTGCGGGCCCGACCCTCCTTCGCCCTCTGGCCTCGATCCTCCAGCACAGAGGATGAACTCGGGGTCGGGCTGCAGAACCCCTACAGGGGTAATACCCGTGAACTCCGTGGGGTACGAGGTGTTCCTGCTCATGCTGCAGTTTCTGTACAGCGGGCAGGTATCCATCGTCCCCCAGAAGCACGAGCCACGGGCCAATTGCGGCGAGAGGGGCTGCTGGCACACGCATTGCTCCTCCGCCGTCGATCTTGCTCTAGACACACTCGCCGCCGCTAGATACTTCGGCGTTGAGCAGCTCGCATTGCTAACTCAGAAACAACTAGCAAGCATGGTGGAGAAAGCTTCCATTGAAGATGTGATGAAGGTCTTGGTAGCTTCAAGAAAGCAAGACATGCACCAACTGTGGACCACATGCTCCCACCTTGTAGCCAAATCCGGTCTCCCACCGGAGGTTCTCGCCAAGCACCTCCCCATCGACATCGTCGCCAAAATCGAAGACCTCCGTCTAAAATCCTCCCTCGCCCGCCGTACCGCCGCCTTCCTCCCCCACCACCACCACCCGGACCTCTCCGCCGCGGCAGACCTCGAGGACCAAAAGATCCGCCGGATGAGGCGAGCGCTAGACTCATCCGACGTGGAGCTCGTAAAGCTAATGGTAATGGGAGAAGGGCTCAATCTCGACGACGCATTAGCTCTGCATTACGCCGTCGAGAATTGTAGCCGCGAAGTGGTGAAAGCGCTGCTGGAACTCGGGGCAGCCGATGTCAACTATCCCGCAGGTCCAGCAGGAAAAACACCACTTCATATCGCGGCGGAAATGGTTTCGCCCGATATGGTAGCGGTCCTGCTGGACCACCACGCAGACCCAAACGTGAGAACCATCGACAACGTGACGCCATTGGACACACTAAGAACCCTAACCTCCGATTTTCTGTTCAAAGGCGCAGTCCCTGGCCTGACTCACATTGAACCAAACAAATTAAGGCTGTGTTTGGAGCTTGTTCAATCGGCGGCACTTGTTTTGTCTCGTGAAGAAGGTAACGCCAATAACAACAATGTTGCTTCTTCTACAACTCCACATCATCATCATATTTATCCTCCTTCCATGAACGAAGATCATCATAGCAGTTCAAGCAGTGGCGGCAATAATAACAATAACACCAACATTAACTTGGATTCCAGGTTGGTGTATCTTAACCTTGGTGCCACCTTAGGTGGTGGTGGTGGTGGCGGCGCCTCCGGTCAAATGAGTTCAAGGTTGGATGGTGATGATGATAACCGTCATGGTGAAGCAGCAATGTACCATCACCACCACCACCATCATCACCATTCTCATCATGACTTTTAG 1512 0.5384 MSSTLEESLRSLSLDYLNLLINGQAFSDVTFSVEGRLVHAHRCILAARSLFFRKFFCGPDPPSPSGLDPPAQRMNSGSGCRTPTGVIPVNSVGYEVFLLMLQFLYSGQVSIVPQKHEPRANCGERGCWHTHCSSAVDLALDTLAAARYFGVEQLALLTQKQLASMVEKASIEDVMKVLVASRKQDMHQLWTTCSHLVAKSGLPPEVLAKHLPIDIVAKIEDLRLKSSLARRTAAFLPHHHHPDLSAAADLEDQKIRRMRRALDSSDVELVKLMVMGEGLNLDDALALHYAVENCSREVVKALLELGAADVNYPAGPAGKTPLHIAAEMVSPDMVAVLLDHHADPNVRTIDNVTPLDTLRTLTSDFLFKGAVPGLTHIEPNKLRLCLELVQSAALVLSREEGNANNNNVASSTTPHHHHIYPPSMNEDHHSSSSSGGNNNNNTNINLDSRLVYLNLGATLGGGGGGGASGQMSSRLDGDDDNRHGEAAMYHHHHHHHHHSHHDF* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0834 503 MobiDBLite consensus disorder prediction 425 443 - -
Ahy6g0834 503 ProSiteProfiles BTB domain profile. 27 113 IPR000210 GO:0005515
Ahy6g0834 503 ProSiteProfiles Ankyrin repeat profile. 317 349 IPR002110 GO:0005515
Ahy6g0834 503 CDD BTB_POZ_NPR_plant 10 166 - -
Ahy6g0834 503 Gene3D Potassium Channel Kv1.1; Chain A 2 199 IPR011333 -
Ahy6g0834 503 SUPERFAMILY Ankyrin repeat 276 359 IPR036770 -
Ahy6g0834 503 SUPERFAMILY POZ domain 10 164 IPR011333 -
Ahy6g0834 503 ProSiteProfiles Ankyrin repeat region circular profile. 317 347 - -
Ahy6g0834 503 SMART BTB_4 27 166 IPR000210 GO:0005515
Ahy6g0834 503 MobiDBLite consensus disorder prediction 462 484 - -
Ahy6g0834 503 Pfam Ankyrin repeats (3 copies) 265 347 IPR002110 GO:0005515
Ahy6g0834 503 PANTHER REGULATORY PROTEIN NPR5 4 493 - -
Ahy6g0834 503 PANTHER BTB/POZ DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN NH5.2 4 493 IPR044284 GO:0099402
Ahy6g0834 503 Pfam Domain of unknown function (DUF3420) 201 259 IPR024228 -
Ahy6g0834 503 Gene3D - 248 365 IPR036770 -
Ahy6g0834 503 MobiDBLite consensus disorder prediction 404 443 - -
Ahy6g0834 503 SMART ANK_2a 282 312 IPR002110 GO:0005515
Ahy6g0834 503 SMART ANK_2a 317 346 IPR002110 GO:0005515
Ahy6g0834 503 Pfam BTB/POZ domain 18 116 IPR000210 GO:0005515
Ahy6g0834 503 MobiDBLite consensus disorder prediction 404 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0834 Ahy-Chr6 10497492 10500464 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Ahy6g0834 BTB 2.70E-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0834 K14508 - pvy:116132798 719.539
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0499 16 9157772 9160797 Ahy6g0834 6 10497492 10500464 hybridization
Ahy6g0834 6 10497492 10500464 Ahy12g1521 12 80705625 80711198 PCT
Ahy12g1521 12 80705625 80711198 Ahy6g0834 6 10497492 10500464 PCT