Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0737 ATGGACGCTGATGGAGTCACCGCCTCTTCCTCTCCAAACGCTGCTGACGAAGGTGTGAATAATTATAAAAAAGATGGTGATGAGTTGTATGAGAGAGTGTGGCGAGCATGCGCGGGAGAATGTGTATATATCCCCCGTGTCGGAGATAAGGTGCTGTACTTCCCTCAAGGCTACTTAGAACAGGTTGCTTCATTCACTCAGCATCAGCAAGATGGTCACGTGGATATTCCTGTGCATAATCTACCTTCTAAGATCCTGTGCCGGGTTGTGTTTGTTCAGTTAAAGACTGAAGCTTCCAGAGACGAGGTTTTTGCTCAAGTTACTCTACTTCCAGAGTCCAAGCAAGATGAACTTAGTTCCAAGGACACAGACACAGCTCAGATACCCAGCAGATCTTCTGTATACTCCTTTAGCAAGATACTTACTTCATCAGACTCTGGTGCTCATGGCGGATTCTCTATTCCCAAGAGGCATGCTTATGAATGCTTCCCCCCTCTGGACATGACTCTTAAACCCCCAGCACAAGAGCTTGTTGCAAGGGACTTGCATGGGTACGACTGGCGCTTCCGACATATATTTCGTGGTCAGCCAAGACGAAACTTACTTACTAGCGGTTGGAGCACATTTTTAAACTCCAAAAAACTTGCTGCTGGAGATACATGCATATTCTTCAGGGGAGAAAACGGAGAACTCCGAATTGGGGTTCGTCGAGCTATGAAACGGCAAAATATTGCATCCCCATCTGCTTCTCTGATATCAGCTCATAGCATGCAACTAGGAATACTGGCTAGTGCTTCCAATGCTGTTGCCACAGGATCCATGTTCACTGTATACCACTACCCTCGGACGAATCCCTTTGAATTTATCATTCCTTTGCAACGTTACATGAAGTCAACTCAAATGAGCTATGCAACTGGTACGAGAGTACAATTGCTGCTTGATGTTGAAGAACCTAGAAAAAGATATGCAGGTACAGTAATCAGTATTGAAGATTTTGATGGCATTAGGTGGCCTGGTTCTGAATGGAGAAGCCTCAAGGTCCAATGGGATGCTACACCGCATGCAGATATGCATCCAGAAAGAGTTTGTCCTTGGTGGATTGAGGCCTTGGACTGTGCCAAGCAGAAACACATTCCTATTCTCCCCGCACCAAAGAAAGCCCGTCCAAATAACCTGCCGTTGCCTGAATTAAGTGGCTTTGTCAAGGATGAGATAATTCGGTATTCAGCTAAGCCTGCAGCTCAGAGACTGGAAAGGGACTTGCAAGGTCAAGACTACAATGATGTAGCTTCTCCACAGCCTGTGCTAAAACAACCATCATCAAAGGTTATTTGTAACTCAAACCTTGGGATTGAGAATCAGCTTCGAATTCCGATTCAAGACCCTGTTCACCAGTGTACTGGAAGCTCAATGTCGTTTCCACATGAAGACTTGTCAACTTCCAGTTCAAATGCGTACTGTCCGGGATCTGAATCCCAAGGATGGCCTTCTTCTGAATCTAAAGATGAAAACGATGTTCCTTTTGGCCCACATAGCAGTTGTACTACATACAAGCTTTTTGGGATTTACTTAACTGATTGCCAATCGGAGCTCCCTTCACCACAATTTTCTGCTTACAGCAAGATTCCAAGTACCATTTCTATTCCTCCAATGTCTCACTCAAGTATTTATGCAACAATCCAGGCAGCAAAACAGTGCGGAAATATTCAAGGTGTTTCCTCAGAGAAAAGATGCAAGAAGTGTCGCTCTGATAATAGTAGAAGTTGCACAAAGGTTCTTAAGCAAGGAACTGCTCTTGGCAGAGCAATTGATCTCACTCGTTTTGCTGGATATGACGAACTCATTTCTGAACTTGACTGGATGTTTGATTTTGGCGGAGGCTTAATTAATGGAAGCAGTGGATGGCATGTGACCTGCATAGACGAGGATGGAGATATTATGCTCCTGGGAGATTTCCCATGGCAGGACTTTCGATCCATGGTGCAAAAGATGATAATACGTCCAAAGGATGCAATTAACAATCCTAGTCCAAGCTCCTCTGCATATCCTGCAAGCATTTAG 2061 0.4469 MDADGVTASSSPNAADEGVNNYKKDGDELYERVWRACAGECVYIPRVGDKVLYFPQGYLEQVASFTQHQQDGHVDIPVHNLPSKILCRVVFVQLKTEASRDEVFAQVTLLPESKQDELSSKDTDTAQIPSRSSVYSFSKILTSSDSGAHGGFSIPKRHAYECFPPLDMTLKPPAQELVARDLHGYDWRFRHIFRGQPRRNLLTSGWSTFLNSKKLAAGDTCIFFRGENGELRIGVRRAMKRQNIASPSASLISAHSMQLGILASASNAVATGSMFTVYHYPRTNPFEFIIPLQRYMKSTQMSYATGTRVQLLLDVEEPRKRYAGTVISIEDFDGIRWPGSEWRSLKVQWDATPHADMHPERVCPWWIEALDCAKQKHIPILPAPKKARPNNLPLPELSGFVKDEIIRYSAKPAAQRLERDLQGQDYNDVASPQPVLKQPSSKVICNSNLGIENQLRIPIQDPVHQCTGSSMSFPHEDLSTSSSNAYCPGSESQGWPSSESKDENDVPFGPHSSCTTYKLFGIYLTDCQSELPSPQFSAYSKIPSTISIPPMSHSSIYATIQAAKQCGNIQGVSSEKRCKKCRSDNSRSCTKVLKQGTALGRAIDLTRFAGYDELISELDWMFDFGGGLINGSSGWHVTCIDEDGDIMLLGDFPWQDFRSMVQKMIIRPKDAINNPSPSSSAYPASI* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0737 686 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 21 679 IPR044835 GO:0003677|GO:0006355|GO:0009725
Ahy6g0737 686 MobiDBLite consensus disorder prediction 468 500 - -
Ahy6g0737 686 Gene3D - 303 376 - -
Ahy6g0737 686 ProSiteProfiles B3 DNA-binding domain profile. 137 239 IPR003340 GO:0003677
Ahy6g0737 686 PANTHER AUXIN RESPONSE FACTOR 21 679 - -
Ahy6g0737 686 CDD B3_DNA 136 237 IPR003340 GO:0003677
Ahy6g0737 686 SMART B3_2 137 239 IPR003340 GO:0003677
Ahy6g0737 686 Pfam Auxin response factor 265 346 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Ahy6g0737 686 Pfam B3 DNA binding domain 137 238 IPR003340 GO:0003677
Ahy6g0737 686 Gene3D - 582 674 - -
Ahy6g0737 686 SUPERFAMILY DNA-binding pseudobarrel domain 125 261 IPR015300 -
Ahy6g0737 686 MobiDBLite consensus disorder prediction 1 22 - -
Ahy6g0737 686 ProSiteProfiles PB1 domain profile. 587 669 IPR000270 GO:0005515
Ahy6g0737 686 MobiDBLite consensus disorder prediction 1 17 - -
Ahy6g0737 686 SUPERFAMILY CAD & PB1 domains 589 663 - -
Ahy6g0737 686 MobiDBLite consensus disorder prediction 468 507 - -
Ahy6g0737 686 Gene3D - 134 239 IPR015300 -
Ahy6g0737 686 Pfam AUX/IAA family 584 672 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0737 Ahy-Chr6 9066076 9078592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0737 580 679 B3 DNA Binding Superfamily AT5G62000 45.000 2.81e-24 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Ahy6g0737 AUX_IAA 5.70E-08 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0737 - - lja:Lj1g3v4764520.2 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0560 16 10728427 10735541 Ahy6g0737 6 9066076 9078592 hybridization