Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0730 ATGGCAGAGCTAAGTGCGGCCGCAACCTTCACACCCAGCGATGAAGAACTCATTCATTTTCTTTCCGACAAGGTGAAAGGCCAATCAATGGACGAGGACGCCGCCATCAACATCCACGAATGTGAATACTTGTACGGCCGCAACAAGAACCCTTGGGACATTTGGCGTGACTTCGCCGGCGACGTTGATGCCGGCAGGACCGCCCTTTTCTTCTTCTCTCCCAACAAAAAGCACCATTCCACCGCCTCCCGCCCCATCGGAGCCGGCGTCTGGGAAGCTGAAGCTGAAACCATTGACGGCGAAGGAATCGTTGGCAAGGGCAAGAACCGCCGTATTGGGACCAAGAAATGTTTCGTCTTTGATAAGAGTGGCACCTCCTACGATGGTGCATGGATCTTGCATGAATACACTCTTCATGGATCGTCGCTCCACACTAATACTTCAGTGGATAATAGCTATGTTATATGCAAATTGATAAAGAATGTAGAAGGTGAAGCTCATCCAGTTGAGGTGCAGTTTGGAGACAAAAGAAAAAGGCATGCGCAATCCGCCACCACCAGCGGCGTTCAAATTGATGTTAACGCTCCTCATTCATATGTGGTGCTGACCACTTGTCATATATATTTTAAGAGAAATACTAAAGAACAAGAGGTCCAATTCATACCAAATGAACTTGGCAGGCGAATGTTGTTGGAAAGGAAATATGATGAGGATGGTTTAATTCTTTCTTTCATTGTTAAACAAGGATTACCAATCACGAACGAGAACCTCATCAGAAACCTCATGCAGCTGCAAGGGGGAACAAGAAGAGGTGGAAAAGGCCTCTAA 828 0.471 MAELSAAATFTPSDEELIHFLSDKVKGQSMDEDAAINIHECEYLYGRNKNPWDIWRDFAGDVDAGRTALFFFSPNKKHHSTASRPIGAGVWEAEAETIDGEGIVGKGKNRRIGTKKCFVFDKSGTSYDGAWILHEYTLHGSSLHTNTSVDNSYVICKLIKNVEGEAHPVEVQFGDKRKRHAQSATTSGVQIDVNAPHSYVVLTTCHIYFKRNTKEQEVQFIPNELGRRMLLERKYDEDGLILSFIVKQGLPITNENLIRNLMQLQGGTRRGGKGL* 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0730 275 SUPERFAMILY NAC domain 3 159 IPR036093 GO:0003677|GO:0006355
Ahy6g0730 275 Pfam No apical meristem (NAM) protein 9 138 IPR003441 GO:0003677|GO:0006355
Ahy6g0730 275 ProSiteProfiles NAC domain profile. 4 161 IPR003441 GO:0003677|GO:0006355
Ahy6g0730 275 Gene3D NAC domain 13 164 IPR036093 GO:0003677|GO:0006355
Ahy6g0730 275 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 9 185 - -
Ahy6g0730 275 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 9 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0730 Ahy-Chr6 8971880 8973464 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0730 1 170 NAC Transcription Factor Family AT5G24590 31.111 4.25e-14 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Ahy6g0730 NAM 2.90E-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0730 - - ahf:112756623 540.806