Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0729 ATGACTGGTTCTCATCAAAATTCAACACACTCTGCATCACACACACAACAAGATAAAGCTTCAACACCATCACCATGCGATTACTGCAACAGCTCCAGATCAGTTCTGTACTGCAGAGCAGATTCAGCGAAGCTCTGTTTCAAATGTGACCGCGAGGTTCATTCAACAAACCAGCTCTTCTCGAAGCACACACGCACTCTTCTCTGTGACTCTTGCTACGATTCCCCTGCTTCCATACTCTGTTCCACGGAATCCTCTGTTCTCTGCCATAATTGTGACTGGGAAAGTCACAACCTTTCTCTTCCAACCGTACACGAGAGAGGTCCCCTTGAAGGATTCACTGCTTGCCCTTCCGTTTCGGAGCTTTTAACCATTCTGGGGTTTGAAGATGTTGGGAAAAAGGCTCTGCTTTATGGTGATGGTGGTGGTGGTGGTGATGGAGGAGGAGGGGAAAAGAATTCTGCTGACGACTTTATGGGGTGTGAGATTGAAGGCTTTTCAGATTTCTTCGTTTGGGATGCTCCTTCTGTTGTTAGTCTCGATGATTTGATTTCTTCTTCTGCTCCTTCTCATAACTTTCAGGCTATGGAGGTTCCTCCACTCCCCAAGAATCGCAAGTCTTCTTGTGGGAGACATAGAGAAGAGATTCTTAGTCAGCTTCGTGAACTCGCAAAGTCTGAGCCTTTAGACTTAGACACTGAACAACAACAATACTTGCAATCAGGGAACATGTCCACAGATCTTGAACATGATTTCAAGACTGATAAATTCCCTTCTTATGAGTGGCATAGAAGAAGCAGTGAACCTATGAATCAAGTTGTTCCTCTGAATACATTGTTGAATGAAGAAGTTGCAGTTGAACATCCAACTTCTGCAGTTTCGGAGAACAATGAGGGGAAAACACCCATATCTTTCAAATCCGAAACTGTATCAGTTGTTCCAAAAGCTACTCCATGTGAGTTAACAAGTCAAGAAAGAGATTCTGCTTTGTTACGGTACAAGCAAAAGAAGAAAACCAGAAGATATGAGAAGCACATAAGATATGAATCACGAAAAGTTCGGGCACAAAGCAGGATAAGAGTCAAGGGCCGATTTGCCAAGATGGAACACTGA 1113 0.4376 MTGSHQNSTHSASHTQQDKASTPSPCDYCNSSRSVLYCRADSAKLCFKCDREVHSTNQLFSKHTRTLLCDSCYDSPASILCSTESSVLCHNCDWESHNLSLPTVHERGPLEGFTACPSVSELLTILGFEDVGKKALLYGDGGGGGDGGGGEKNSADDFMGCEIEGFSDFFVWDAPSVVSLDDLISSSAPSHNFQAMEVPPLPKNRKSSCGRHREEILSQLRELAKSEPLDLDTEQQQYLQSGNMSTDLEHDFKTDKFPSYEWHRRSSEPMNQVVPLNTLLNEEVAVEHPTSAVSENNEGKTPISFKSETVSVVPKATPCELTSQERDSALLRYKQKKKTRRYEKHIRYESRKVRAQSRIRVKGRFAKMEH* 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0729 370 ProSiteProfiles Zinc finger B-box type profile. 21 68 IPR000315 GO:0008270
Ahy6g0729 370 MobiDBLite consensus disorder prediction 1 25 - -
Ahy6g0729 370 Pfam CCT motif 326 368 IPR010402 GO:0005515
Ahy6g0729 370 ProSiteProfiles CCT domain profile. 326 368 IPR010402 GO:0005515
Ahy6g0729 370 CDD Bbox1_BBX-like 25 68 - -
Ahy6g0729 370 SMART bboxneu5 69 110 IPR000315 GO:0008270
Ahy6g0729 370 SMART bboxneu5 21 68 IPR000315 GO:0008270
Ahy6g0729 370 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 13 24 370 - -
Ahy6g0729 370 ProSiteProfiles Zinc finger B-box type profile. 64 110 IPR000315 GO:0008270
Ahy6g0729 370 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 24 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0729 Ahy-Chr6 8967632 8970372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0729 26 341 C2C2-CO-like Transcription Factor Family AT2G47890 40.964 3.44e-69 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Ahy6g0729 CCT 1.10E-14 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0729 - - gmx:100777428 478.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0569 16 10817269 10820012 Ahy6g0729 6 8967632 8970372 hybridization