Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ahy6g0702 ATGATGACGAAGAGGAAAAGCCAGAGGATTGGGAAGAAGGAGAGGAGCAAGTTCACGATGAAGAAGGGTACTCTTTCAACCACTTCCCACCTTCAGCTTCAGCTAGGTCAAGTTTCTCTCTTTCCACTCCTTCATCCTCCATCTTCTTCTTCTGCTTCCGCTCCTTCTTCCCGCTTCCAGAGCCTTCTAGATGCTGAATCTCACCGCCCAAACCCTCCCGCGGTCAACGATAACAACAACGCCTCCGACGACAGAGACTGTATTCTTAGCCAGGACTTCTTTTGCACTCCGGATTATATTACGCCGGATAATCAGAATTTCAACGGCTTGGATTTCAATATGGAGAATACCCCTTGCCCTAAATCACCGGAGAAGCTCAACACTACAAAAAGCAAGAGGTGCCGATTGGATGCTATCTCAGTTAATCCTCTCAGCCCAAACTTTTCTGGTGACCATCAACAAGTTGTTGAACTTGGAAAGGACTCTGTTGGGGAGGAAGTAGCTGCTGAGAAAACAGTAGCAGCTGATAAACCAAAGGCCCAAAATTATGTGTCACATTCTGCAGTTGCATTGCGCTGCAGGGTTATGCCTCCTCCCTGCATCCAGAATCCATATTTGAAAGATGTTTCACAAAAGGAGACAGACCCCTTTGGAAACCAAAGGATAAAATGTGCAGGTCTCTTCCCTGGAATAACTGGTGATGATGGTCTTTCACGCTATCGCACTGATTTTCATGAGATTGAGCAAATTGGTAGAGGGCACTTTAGTAGTGTTTTCAAAGTATTAAAACGAATAGATGGGTGCCTTTATGCTGTGAAACGCAGTGCCAGACAGTTACGACTGGAAACAGAAAGGAGAAAAGCTTTGATGGAAGTTCAAGCATTGGCTGCATTAGGTTCTCATGCAAACATAGTGGGATACTACTCTTCATGGTTTGAAAATGAACAGCTGTATATTCAGATGGAGCTTTGTGATCACAGCTTATCCATAAACAAATGCTCTTCATCATTTACAGAAGGACAAGTGTTAGAGGCTCTATATCAGATTGCCAATGCACTGCGGTTTATACACGAGAAGGGAATAGCTCATTTAGATGTCAAGCCTGATAATATTTATGTCAAAAATGGTGTATATAAACTTGGTGATTTTGGATGTGCAACTCTCCTTGACAATAGCCTCCTGGTTGAGGAGGGAGATGCACGTTATATGCCTCAGGAAATCCTCAATGATAATTATGATCACCTTGACAAAGTTGATATCTTTTCTTTGGGAGCTTCTGTGTATGAGTTCATTCGGCGATTGCCTTTGCCAGAATCAGGATCCCAATTTTTTAATCTTAAAGAGGGAAAGCTACCACTTTTGCCTGGCCACTCATTGCAATTCCAAAACTTGCTCAAGGCCATGATGGACCCTGATCCAGTTAAGCGTCCTTCTGCTCGGGAGTTGATAGAGAATCCAATTTTCGACAAGGTCATTAGAACAGCCAAAATTTGA 1494 0.4344 MMTKRKSQRIGKKERSKFTMKKGTLSTTSHLQLQLGQVSLFPLLHPPSSSSASAPSSRFQSLLDAESHRPNPPAVNDNNNASDDRDCILSQDFFCTPDYITPDNQNFNGLDFNMENTPCPKSPEKLNTTKSKRCRLDAISVNPLSPNFSGDHQQVVELGKDSVGEEVAAEKTVAADKPKAQNYVSHSAVALRCRVMPPPCIQNPYLKDVSQKETDPFGNQRIKCAGLFPGITGDDGLSRYRTDFHEIEQIGRGHFSSVFKVLKRIDGCLYAVKRSARQLRLETERRKALMEVQALAALGSHANIVGYYSSWFENEQLYIQMELCDHSLSINKCSSSFTEGQVLEALYQIANALRFIHEKGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDNSLLVEEGDARYMPQEILNDNYDHLDKVDIFSLGASVYEFIRRLPLPESGSQFFNLKEGKLPLLPGHSLQFQNLLKAMMDPDPVKRPSARELIENPIFDKVIRTAKI* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ahy6g0702 497 SMART serkin_6 244 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0702 497 MobiDBLite consensus disorder prediction 46 64 - -
Ahy6g0702 497 Gene3D Phosphorylase Kinase; domain 1 234 322 - -
Ahy6g0702 497 Pfam Protein kinase domain 244 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0702 497 PANTHER BNAA08G27310D PROTEIN 81 402 - -
Ahy6g0702 497 PANTHER BNAA08G27310D PROTEIN 415 491 - -
Ahy6g0702 497 MobiDBLite consensus disorder prediction 46 82 - -
Ahy6g0702 497 SUPERFAMILY Protein kinase-like (PK-like) 238 490 IPR011009 -
Ahy6g0702 497 ProSitePatterns Protein kinases ATP-binding region signature. 250 273 IPR017441 GO:0005524
Ahy6g0702 497 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
Ahy6g0702 497 Gene3D Transferase(Phosphotransferase) domain 1 323 493 - -
Ahy6g0702 497 MobiDBLite consensus disorder prediction 1 26 - -
Ahy6g0702 497 ProSiteProfiles Protein kinase domain profile. 244 488 IPR000719 GO:0004672|GO:0005524|GO:0006468
Ahy6g0702 497 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 81 402 - -
Ahy6g0702 497 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 415 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ahy6g0702 Ahy-Chr6 8559003 8562360 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ahy6g0702 1 491 Core Cell Cycle Gene Families AT1G02970 60.685 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Ahy6g0702 Pkinase 3.70E-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ahy6g0702 K06632 - gmx:547742 765.763
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ahy16g0595 16 11198594 11202181 Ahy6g0702 6 8559003 8562360 hybridization